Job Description P0AFF6 Confidence 63.94% Date Thu Jan 5 11:26:07 GMT 2012 Rank 232 Aligned Residues 60 % Identity 15% Template c3camB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:cold-shock domain family protein; PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis Resolution 2.60 Å

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		139	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																						.	.
Query SS confidence											.	.	.																						.	.
Query Sequence		T	G	V	V	K	K	V	N	R	.	.	.	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	.	.	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F	V	T
Query Conservation											.	.	.																						.	.
Alig confidence											.	.	.																						.	.
Template Conservation
Template Sequence		T	G	I	V	K	W	F	N	D	A	K	G	F	G	F	I	T	P	D	E	G	G	E	D	L	F	A	H	F	S	A	I	N	X	E	G	F	K	T	L	K	E	G	Q	R	V	S	F	D	V	T	T	G	P	K	G	K	Q	A	A	N	I	Q	A	A
Template Known Secondary structure										T	T	T	T							S	S	S								G	G	G			G	G	G	G	S	S			T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions