Job Description P0AFF6 Confidence 31.51% Date Thu Jan 5 11:26:07 GMT 2012 Rank 278 Aligned Residues 59 % Identity 15% Template c2ytxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																										.																	.
Query SS confidence																										.																	.
Query Sequence		H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	.	N	A	E	A	V	I	L	R	E	D	M	L	P	R	E	N	.	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q
Query Conservation																										.																	.
Alig confidence																										.																	.										.	.	.
Template Conservation																																																					.	.	.
Template Sequence		K	K	Q	A	R	C	Q	G	V	V	C	A	M	K	E	A	F	G	F	I	E	R	G	D	V	V	K	E	I	F	F	H	Y	S	E	F	K	G	D	L	E	T	L	Q	P	G	D	D	V	E	F	.	.	.	T	I	K	D	R	N	G	K	E	V
Template Known Secondary structure																S	S							S	S	S								T	T	T			S		T	T	S			S							.	.	.						S	S	S		B
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions