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Job Description | P0AFF6 | Confidence | 96.01% | Date | Thu Jan 5 11:26:07 GMT 2012 |
Rank | 108 | Aligned Residues | 69 |
% Identity | 14% | Template | c2rf4A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; |
PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43
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Resolution | 3.10 Å |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
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. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
F | R | E | H | E | G | E | I | I | T | G | V | V | K | K | V | N | R | D | N | I | S | L | D | L | G | N | N | A | E | A | V | I | L | R | E | D | M | . |
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L | P | R | E | N | F | R | P | G | D | R | V | R | G | V | L | Y | S | V | R | P | E | A | R | G |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
W | Q | P | Q | V | G | D | V | L | E | G | Y | I | F | I | Q | S | A | S | H | I | G | L | L | I | H | D | A | F | N | A | S | I | K | K | N | N | I | P | V | D | W | T | F | V | H | N | D | G | N | S | L | G | H | W | V | D | S | N | G | E | P | I | D | G | K | L | R | F | T | V | R | N | V | H | T | T | G | R | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
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193 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | Q | L | F | V | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | S | V | D | G | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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243 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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