Job Description P0AFF6 Confidence 65.64% Date Thu Jan 5 11:26:07 GMT 2012 Rank 225 Aligned Residues 53 % Identity 13% Template c2r8kB_ PDB info PDB header:replication, transferase/dna Chain: B: PDB Molecule:dna polymerase eta; PDBTitle: structure of the eukaryotic dna polymerase eta in complex with 1,2-2 d(gpg)-cisplatin containing dna Resolution 3.30 Å

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450								.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.																			.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	.	.	.	.	.	.	.	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	E	K	A	G	A	L	I	M	A	A	R
Query Conservation																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	S	F	W	T	L	G	G	V	L	G	K	E	L	I	D	V	L	D	L	P	H	E	N	S	I	K	H	I	R	E	T	W	P	D	N	A	G	Q	L	K	E	F	L	D	A	K	V	K	Q	S	D	Y	D	R	S	T	S	N	I	D	P	L	K	T	A	D	L	A	E	K	L	F	K	L	S	R
Template Known Secondary structure		G	G	G	S	S	S	S		S										T	T			S	S										S		S		T											T	S	S	T	T			S	S	S					T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions