Job Description P0AFF6 Confidence 94.76% Date Thu Jan 5 11:26:07 GMT 2012 Rank 117 Aligned Residues 84 % Identity 19% Template c2qndA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:fmr1 protein; PDBTitle: crystal structure of the kh1-kh2 domains from human fragile x mental2 retardation protein Resolution 1.90 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		V	G	A	C	V	G	M	R	G	A	R	V	Q	A	V	S	T	E	L	G	.	.	.	.	.	.	.	.	.	G	E	R	I	D	I	V	L	W	D	D	N	P	A	Q	F	V	I	N	A	M	A	P	A	D	V	A	S	I	V	V	D	E	D	K	H	T	M	D	I	A	V	E	A	G	N	L	A	Q	A	I
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	G	L	A	I	G	T	H	G	A	N	I	Q	Q	A	R	K	V	P	G	V	T	A	I	D	L	D	E	D	T	C	T	F	H	I	Y	G	E	D	Q	D	A	V	K	K	A	R	S	F	L	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	E	D	V	I	Q	V	P	R	N	L	V	G	K	V	I
Template Known Secondary structure								G	G	G								T	S	T	T								T	T	T	T							S	S												.	.	.	.	.	.	.	.	.	.	.	.											G	G	G
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.													.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	R	N	G	Q	N	V	R	L	A	S	Q	L	S	G	W	.	E	L	N	V	M	T	V	D	D
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		G	K	N	G	K	L	I	Q	E	I	V	D	K	S	G	V	V	R	V	R	I	E	A	E	N	E
Template Known Secondary structure			G	G	G											T		S									T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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