Job Description P0AFF6 Confidence 97.88% Date Thu Jan 5 11:26:07 GMT 2012 Rank 72 Aligned Residues 72 % Identity 21% Template c2pmzE_ PDB info PDB header:translation, transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																												.																																																					.
Template Sequence		Y	V	P	V	V	Q	E	V	V	E	G	E	V	L	Q	V	D	N	Y	G	I	F	V	N	L	G	.	P	M	D	G	L	V	H	I	S	Q	I	T	D	D	T	L	K	Y	D	N	V	R	G	I	I	F	G	E	K	S	K	K	V	I	Q	K	G	D	K	V	R	A	R	V	I	S	V	A	S	T	V	P	.
Template Known Secondary structure						S	S												S	S							S	.	S	S						S	T	T	T		S	S					B	T	T	T	T	B				S	S	S						T	T									B							.
Template Predicted Secondary structure																												.																																																					.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	F	V	T	R	S	K	P	E	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	I	A	L	T	M	R	Q	P	Y	L
Template Known Secondary structure		.							S	S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			159	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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