Job Description P0AFF6 Confidence 99.91% Date Thu Jan 5 11:26:07 GMT 2012 Rank 10 Aligned Residues 133 % Identity 20% Template c2owoA_ PDB info PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate Resolution 2.30 Å

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		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Q	A	K	H	Q	A	E	A	H	A	A	I	D	T	F	T	K	Y	L	D	I	D	E	D	F	A	T	V	L	V	E	E	G	F	.	S	T	L	E	E	L	A	Y	V	P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	N	A	L	A	T	I	A	Q	A	Q	E	E
Query Conservation																																				.
Alig confidence																																				.																													.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		A	Q	R	K	E	S	L	K	H	F	V	S	R	R	A	M	D	V	D	G	M	G	D	K	I	I	D	Q	L	V	E	K	E	Y	V	H	T	P	A	D	L	F	K	L	T	A	G	K	L	T	G	L	E	R	M	G	P	K	S	A	Q	N	V	.	.	.	.	.	.	.	V	N	A	L	E	K	A	K	E	T
Template Known Secondary structure													S	T	T	T	T			T	T												T	T			S	S	G	G	G	G	G	T								T	S	T	T										.	.	.	.	.	.	.								T	B
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.								.	.	.	500	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L	I	M	A	A	R	N	I	C	W	F	G	D	E
Query Conservation
Alig confidence										.	.	.																		.																															.	.	.	.	.	.
Template Conservation										.	.	.																		.																															.	.	.	.	.	.
Template Sequence		T	F	A	R	F	L	Y	A	.	.	.	L	G	I	R	E	V	G	E	A	T	A	A	G	L	A	A	Y	.	F	G	T	L	E	A	L	E	A	A	S	I	E	E	L	Q	K	V	P	D	V	G	I	V	V	A	S	H	V	H	.	.	.	.	.	.	N	F	F	A	E	E
Template Known Secondary structure										.	.	.	T	T		T	T													.			S						T							T	T	S	T	T											.	.	.	.	.	.				T
Template Predicted Secondary structure										.	.	.																		.																															.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.				.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.							.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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