Job Description P0AFF6 Confidence 96.90% Date Thu Jan 5 11:26:07 GMT 2012 Rank 90 Aligned Residues 80 % Identity 18% Template c2nn6G_ PDB info PDB header:hydrolase/transferase Chain: G: PDB Molecule:exosome complex exonuclease rrp40; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190
Predicted Secondary structure																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	.	.	.	.	.	D	M	L	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A
Query Conservation																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	P	V	K	G	D	H	V	I	G	I	V	T	A	K	S	G	D	I	F	K	V	D	V	G	G	S	E	P	A	S	L	S	Y	L	S	F	E	G	A	T	K	R	N	R	P	N	V	Q	V	G	D	L	I	Y	G	Q	F	V	V	A	N	K	D	M	E	P	E	M	V	C	I	D	S	C	G	R	A	N
Template Known Secondary structure						S	S												T	T							S	S	S	S						S		S	S	S			S	S		S	S	S	S	S		T	T												T	T	S							S	B	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		191	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		R	G	A	Q	L	.	.	.	.	F	V	T	R	S	K	P	E	M	L	I	E	L	F
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		G	M	G	V	I	G	Q	D	G	L	L	F	K	V	T	L	G	L	I	R	K	L	L
Template Known Secondary structure					S			S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions