Job Description P0AFF6 Confidence 86.50% Date Thu Jan 5 11:26:07 GMT 2012 Rank 186 Aligned Residues 54 % Identity 15% Template c2kcmA_ PDB info PDB header:nucleic acid binding protein Chain: A: PDB Molecule:cold shock domain family protein; PDBTitle: solution nmr structure of the n-terminal ob-domain of so_1732 from2 shewanella oneidensis. northeast structural genomics consortium3 target sor210a. Resolution UNK

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		138	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure										.	.																											.	.	.
Query SS confidence										.	.																											.	.	.
Query Sequence		I	T	G	V	V	K	K	V	.	.	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	P	R	E	.	.	.	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q
Query Conservation										.	.																											.	.	.
Alig confidence										.	.																											.	.	.											.	.	.
Template Conservation																																																			.	.	.
Template Sequence		M	K	G	K	V	V	S	Y	L	A	A	K	K	Y	G	F	I	Q	G	D	D	G	E	S	Y	F	L	H	F	S	E	L	L	D	K	K	D	E	G	K	L	V	K	G	S	M	V	H	F	.	.	.	D	P	T	P	T	P	K	G	L	A
Template Known Secondary structure											T	T	T	T							T	T	S							G	G	G	S	S		S	G	G	G	T	T			T	T	S					.	.	.					T	T	T	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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