Job Description P0AFF6 Confidence 97.43% Date Thu Jan 5 11:26:07 GMT 2012 Rank 76 Aligned Residues 90 % Identity 18% Template c2ihmA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide Resolution 2.40 Å

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		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																											.																								.
Query SS confidence																											.																								.
Query Sequence		P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	N	.	A	L	A	T	I	A	Q	A	Q	E	E	S	L	G	D	N	K	P	A	D	D	L	L	.	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D
Query Conservation																											.																								.
Alig confidence																											.																				.	.	.		.																													.
Template Conservation																																															.	.	.																															.
Template Sequence		S	L	S	Q	L	H	G	L	P	Y	F	G	E	H	S	T	R	V	I	Q	E	L	L	E	H	G	T	C	E	E	V	K	Q	V	R	C	S	E	R	Y	Q	T	M	K	L	.	.	.	F	T	Q	V	F	G	V	G	V	K	T	A	N	R	W	Y	Q	E	G	L	R	T	L	D	E	L	R	E	Q	P	.	Q
Template Known Secondary structure		S	G	G	G	G	T	T		T	T																S											S									.	.	.			T	S	T	T												T	T			S						T			.	T
Template Predicted Secondary structure																																															.	.	.																															.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	T	Q	Q	Q	K	A	G	L	Q	Y	Y	Q	D	L
Template Known Secondary structure		T											T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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