Job Description P0AFF6 Confidence 92.67% Date Thu Jan 5 11:26:07 GMT 2012 Rank 142 Aligned Residues 59 % Identity 19% Template c2hh3A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kh-type splicing regulatory protein; PDBTitle: solution structure of the third kh domain of ksrp Resolution UNK

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		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		M	D	I	A	V	E	A	G	N	L	A	Q	A	I	G	R	N	G	Q	N	V	R	L	A	S	Q	L	S	G	W	E	L	N	V	M	T	V	D	D	L	Q	A	K	H	.	.	.	.	.	.	.	Q	A	E	A	H	A	A	I	D	T	F	T	K	Y	L
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	V	P	V	P	R	H	S	V	G	V	V	I	G	R	S	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	Q	D	D	G	T	G	P	E	K	I	A	H	I	M	G	P	P	D	R	C	E	H	A	A	R	I	I	N	D	L	L
Template Known Secondary structure								T	T	T						T	T	T	T											T							S	S		S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions