Job Description P0AFF6 Confidence 92.19% Date Thu Jan 5 11:26:07 GMT 2012 Rank 147 Aligned Residues 90 % Identity 16% Template c2fllA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:dna polymerase iota; PDBTitle: ternary complex of human dna polymerase iota with dna and dttp Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		A	Q	A	I	G	R	N	G	Q	N	V	R	L	A	S	Q	L	S	G	.	W	E	L	N	V	M	T	V	D	D	L	Q	A	K	H	Q	A	E	A	H	A	A	I	D	T	F	T	K	Y	L	D	I	D	E	D	F	A	T	V	L	V	E	E	G	F	S	T	L	E	E	L	A	Y	V	P	M	K	E	L	L
Query Conservation																					.
Alig confidence																					.													.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		C	A	G	V	A	S	N	K	L	L	A	K	L	V	S	G	V	F	K	P	N	Q	Q	T	V	L	L	P	E	S	C	Q	.	.	.	.	.	H	L	I	H	S	L	N	H	I	K	E	I	P	G	I	G	Y	K	T	A	K	C	L	E	A	L	G	I	N	S	V	R	D	L	Q	T	F	S	P	K	I	L	E
Template Known Secondary structure							S	S									T	S	S		S	S							G	G	G			.	.	.	.	.							S	S	G	G	G	S	T	T												T	T			S							S
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		K	.	.	E	L	G	I	S	V	A	Q	R	I	Q	K	L	S	F
Template Known Secondary structure			.	.															T
Template Predicted Secondary structure			.	.
Template SS confidence
		271			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions