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Job DescriptionP0AFF6
Confidence96.46%DateThu Jan 5 11:26:07 GMT 2012
Rank100Aligned Residues107
% Identity21%Templatec2csdB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.... .... .380.........390.........400.........410.........420.........430.........440....
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Query Sequence  DFATVLV. EEGF. . STLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDL
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Template Sequence  RTLATLIDEHGLSPDAADELI. . . . EHFESIAGILATDLEEIERMYEEGRLSE. EAYRAAVEIQLAE. . LTKKEGVGRKT
Template Known Secondary structure  TTT


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   351........360.........370. ........380.........390......... 400.........410.. .......420...
 
   445....450.... .....460...... ...470.........480..
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Query Sequence  AFKLAARGVC. . . TLEDLAEQGIDD. LADIEGLTDEKAGALI
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Template Sequence  AERLLRA. FGNPERVKQLAREFEIEKLASVEGVGERVLRSLV
Template Known Secondary structure  .SST
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   424.....430 .........440.........450.........460....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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