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Job Description | P0AFF6 | Confidence | 96.46% | Date | Thu Jan 5 11:26:07 GMT 2012 |
Rank | 100 | Aligned Residues | 107 |
% Identity | 21% | Template | c2csdB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:topoisomerase v; |
PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
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Resolution | 2.90 Å |
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368 | . | 370 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
D | F | A | T | V | L | V | . |
E | E | G | F | . |
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S | T | L | E | E | L | A | Y | V | P | M | K | E | L | L | E | I | E | G | L | D | E | P | T | V | E | A | L | R | E | R | A | K | N | A | L | A | T | I | A | Q | A | Q | E | E | S | L | G | D | N | K | P | A | D | D | L | L | N | L | E | G | V | D | R | D | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | T | L | A | T | L | I | D | E | H | G | L | S | P | D | A | A | D | E | L | I | . |
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E | H | F | E | S | I | A | G | I | L | A | T | D | L | E | E | I | E | R | M | Y | E | E | G | R | L | S | E | . |
E | A | Y | R | A | A | V | E | I | Q | L | A | E | . |
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L | T | K | K | E | G | V | G | R | K | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | |
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. | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | |
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445 | . | . | . | . | 450 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | F | K | L | A | A | R | G | V | C | . |
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T | L | E | D | L | A | E | Q | G | I | D | D | . |
L | A | D | I | E | G | L | T | D | E | K | A | G | A | L | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | E | R | L | L | R | A | . |
F | G | N | P | E | R | V | K | Q | L | A | R | E | F | E | I | E | K | L | A | S | V | E | G | V | G | E | R | V | L | R | S | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . |  | S | S |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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424 | . | . | . | . | . | 430 | |
. | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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