Job Description P0AFF6 Confidence 98.61% Date Thu Jan 5 11:26:07 GMT 2012 Rank 41 Aligned Residues 67 % Identity 18% Template c2cqoA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:nucleolar protein of 40 kda; PDBTitle: solution structure of the s1 rna binding domain of human2 hypothetical protein flj11067 Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.													.	.	.	.	.	.
Query SS confidence																										.													.	.	.	.	.	.
Query Sequence		H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	.	N	A	E	A	V	I	L	R	E	D	M	L	.	.	.	.	.	.	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F	V	T	R
Query Conservation																										.													.	.	.	.	.	.
Alig confidence																										.													.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	Y	T	I	F	Q	G	E	V	A	M	V	T	D	Y	G	A	F	I	K	I	P	G	C	R	K	Q	G	L	V	H	R	T	H	M	S	S	C	R	V	D	K	P	S	E	I	V	D	V	G	D	K	V	W	V	K	L	I	G	R	E	M	K	N	D	R	I	K	V	S	L	S	M
Template Known Secondary structure			T	T												T	T							T	T		S	S											S	S			S								T	T														S	S								S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions