Job Description P0AFF6 Confidence 97.50% Date Thu Jan 5 11:26:07 GMT 2012 Rank 75 Aligned Residues 75 % Identity 23% Template c2ckzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase iii 25 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25. Resolution 3.2 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	.	.	.	R	P
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		F	K	P	F	L	G	E	I	V	T	G	W	I	S	K	C	T	A	E	G	I	K	V	S	L	L	G	I	F	D	D	I	F	I	P	Q	N	M	L	F	E	G	C	Y	Y	T	P	E	E	S	A	W	I	W	P	M	D	T	K	L	Y	F	D	V	N	E	K	I	R	F	R	I	E	R	E	V	F	V	D	V
Template Known Secondary structure						T	T												T	T							T	T	S								T	T	T	S		T	T					T	T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	R	G	A	Q	L	F	V	T	R	S	K	P	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	P	A	Y	A	L	L	G	S	C	Q	T	D	G	M
Template Known Secondary structure					S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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