 |
Job Description | P0AFF6 | Confidence | 95.26% | Date | Thu Jan 5 11:26:07 GMT 2012 |
Rank | 113 | Aligned Residues | 64 |
% Identity | 16% | Template | c2c4rL_ |
PDB info |
PDB header:hydrolase | Chain: L: PDB Molecule:ribonuclease e; |
PDBTitle: catalytic domain of e. coli rnase e
|
Resolution | 3.6 Å |
|
 |
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | G | E | I | I | T | G | V | V | K | K | V | N | R | D | . |
. |
N | I | S | L | D | L | G | N | N | A | E | A | V | I | L | R | E | D | M | L | P | R | . |
. |
. |
. |
. |
. |
E | N | F | R | P | G | D | R | V | R | G | V | L | Y | S | V | R | P | E | A | R | G | A | Q | L | F |
Query Conservation |   |
  |   |
|
|
|
|   |
|   |
|   |
|   |
|   |   | . | . |   |   |   |
|   |
|
|   |   |   |
|
|   |
|
|   |   |
|
|
|
|   | . | . | . | . | . | . |
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|   |
|
|
Template Sequence |   |
K | K | A | N | I | Y | K | G | K | I | T | R | I | E | P | S | L | E | A | A | F | V | D | Y | G | A | E | R | H | G | F | L | P | L | K | E | I | A | R | E | Y | F | P | N | I | K | D | V | L | R | E | G | Q | E | V | I | V | Q | I | D | K | E | E | R | G | N | K | G | A | A | L | T |
Template Known Secondary structure |   |
| T | T |
|  |  |
| B | B |
| S |
|
| B | T | T | T | T |  |  |  |  | B | S | S | S | S | S |
|  |  |  |  | T | T | T |
|
| S | T | T |
|
|
|  |  |  |  |
|
| S | S |
|
| B |
|
|  |  | S | S |
|
|
| S | S |
|
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|