Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFF6
Confidence97.24%DateThu Jan 5 11:26:07 GMT 2012
Rank81Aligned Residues85
% Identity16%Templatec2bcuA_
PDB info PDB header:transferase, lyase/dnaChain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410.........420.........430. ........440.........450.........460...
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Query Sequence  PMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPA. . . . DDLLNLEGVDRDLAFKLAARGVCTLEDLAEQG
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Template Sequence  SYQEACSIPGIGKRMAEKI. . . . . . . IEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQA
Template Known Secondary structure  STSTT

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GGGGG

TTTSTT

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   295....300.........310... ......320.........330.........340.........350.........360.......
 
   464.....470.........480.
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Query Sequence  IDDLADIEGLTDEKAGAL
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Template Sequence  . . SLTTQQAIGLKHYSDF
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TTTGG
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   368.370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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