Job Description P0AFF6 Confidence 97.75% Date Thu Jan 5 11:26:07 GMT 2012 Rank 73 Aligned Residues 68 % Identity 15% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.											.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	.	.	.	.	.	.	.	.	.	.	G	N	N	A	E	A	V	I	L	R	E	D	M	L	.	.	.	.	.	.	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		P	E	I	V	K	G	D	V	V	L	G	R	V	V	D	L	R	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	D	E	G	Y	V	K	E	I	S	E	A	V	G	Y	L	D	I	L	K	A	R	V	I	G	.	.	.	.	.	.	.	D
Template Known Secondary structure						T	T												T	T										T	T		S	S			S	S								T	T	S	S	S	S	S				S	S	T	T	T			S	S									S	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.
		194	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	V	T	R	S	K	P	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	R	L	S	T	K	E	E	E	M
Template Known Secondary structure		T	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions