Job Description P0AFF6 Confidence 98.41% Date Thu Jan 5 11:26:07 GMT 2012 Rank 52 Aligned Residues 72 % Identity 14% Template c2ba0A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:archeal exosome rna binding protein rrp4; PDBTitle: archaeal exosome core Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	.	.	.	.	.	.	.	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F	V	T	R	S	K	P
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		Y	T	P	S	V	G	D	V	V	I	G	I	I	R	E	V	A	A	N	G	W	A	V	D	I	Y	S	P	Y	Q	A	F	L	P	V	S	E	N	P	E	M	K	P	N	K	K	P	N	E	V	L	D	I	G	D	A	I	I	A	K	V	L	N	I	D	.	.	.	P	K	M	K	V	T	L	T	M	K	D	R
Template Known Secondary structure						T	T												S	S							S	S	S	S						G	G	G		T	T			T	T	S		G	G	G	T			T	T												.	.	.	T	T									S	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.
		203	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions