 |
Job Description | P0AFF6 | Confidence | 81.26% | Date | Thu Jan 5 11:26:07 GMT 2012 |
Rank | 200 | Aligned Residues | 64 |
% Identity | 17% | Template | c2aq4A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dna repair protein rev1; |
PDBTitle: ternary complex of the catalytic core of rev1 with dna and dctp.
|
Resolution | 2.32 Å |
|
 |
  |   |
421 | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
|
. | . | . | . | . | . | . | . | 460 | . | |
. | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | E | S | L | G | D | N | K | P | A | D | D | L | L | N | L | E | G | V | D | R | D | L | A | F | K | L | A | A | R | . |
. |
G | V | C | T | L | E | D | L | A | E | . |
Q | G | I | D | D | L | A | D | I | E | G | L | T | D | E | K | A | G | A | L | I | M | A | A | R |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|
|
|   | . | . |   |   |   |
|
|
|
|
|
|   | . |
|
|   |
|
|
|   |   |
|   |
|
|
|   |   |   |
|   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   | . | . |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|
Template Sequence |   |
K | S | N | L | S | E | E | F | W | S | S | F | K | L | D | D | L | P | G | V | G | H | S | T | L | S | R | L | E | S | T | F | D | S | P | H | S | L | N | D | L | R | K | R | Y | T | L | D | A | L | K | A | . |
. |
S | V | G | S | K | L | G | M | K | I | H | L | A | L | Q |
Template Known Secondary structure |   |
G | G | G |
|
|  |  |  |  | T | T |
|
| G | G | G | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
534 | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
|
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|