Job Description P0AFF6 Confidence 98.83% Date Thu Jan 5 11:26:07 GMT 2012 Rank 25 Aligned Residues 80 % Identity 20% Template c1yz6A_ PDB info PDB header:translation Chain: A: PDB Molecule:probable translation initiation factor 2 alpha PDBTitle: crystal structure of intact alpha subunit of aif2 from2 pyrococcus abyssi Resolution 3.37 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																										.	.														.	.	.	.	.	.
Query SS confidence																										.	.														.	.	.	.	.	.
Query Sequence		E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	G	.	.	N	N	A	E	A	V	I	L	R	E	D	M	L	.	.	.	.	.	.	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F	V	T	R	S	K	P	E
Query Conservation																										.	.														.	.	.	.	.	.
Alig confidence																										.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	E	G	E	F	V	V	A	T	V	K	R	I	H	N	Y	G	A	F	L	E	L	D	E	Y	P	G	K	E	A	F	M	H	I	S	E	V	A	S	T	W	V	R	N	I	R	D	Y	L	K	E	G	Q	K	V	V	A	K	V	I	R	V	D	P	R	K	G	H	I	D	L	S	L	R	R	V	T	Q	Q
Template Known Secondary structure				T	T												T	T							T	T	S	T	T							G	G	G	T	S	S	S			S		G	G	G	T			T	T												T	T	T	T						S	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	I	E	L	F	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	K	A	K	L	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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