Job Description P0AFF6 Confidence 78.39% Date Thu Jan 5 11:26:07 GMT 2012 Rank 204 Aligned Residues 62 % Identity 13% Template c1t94B_ PDB info PDB header:replication Chain: B: PDB Molecule:polymerase (dna directed) kappa; PDBTitle: crystal structure of the catalytic core of human dna2 polymerase kappa Resolution 2.40 Å

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		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L	I	M	A	A	R
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		R	Q	A	V	M	D	F	I	K	D	L	P	I	R	K	V	S	G	I	G	K	V	T	E	K	M	L	K	A	L	G	I	I	T	C	T	E	L	Y	Q	Q	R	A	L	L	S	L	L	.	.	.	F	S	E	T	S	W	H	Y	F	L	H	I	S	L
Template Known Secondary structure											T		B	G	G	G		T	T	S									G	G	G	T			B							T								.	.	.	S													T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions