Job Description P0AFF6 Confidence 88.44% Date Thu Jan 5 11:26:07 GMT 2012 Rank 179 Aligned Residues 86 % Identity 15% Template c1s97D_ PDB info PDB header:transferase/dna Chain: D: PDB Molecule:dna polymerase iv; PDBTitle: dpo4 with gt mismatch Resolution 2.40 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		A	Q	A	I	G	R	N	G	Q	N	V	R	L	A	S	Q	L	S	G	.	.	.	.	W	E	L	N	V	M	T	V	D	D	L	Q	A	K	H	Q	A	E	A	H	A	A	I	D	T	F	T	K	Y	L	D	I	D	E	D	F	A	T	V	L	V	E	E	G	F	S	T	L	E	E	L	A	Y	V	P	M	K
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		T	V	G	I	S	K	N	K	V	F	A	K	I	A	A	D	M	A	K	P	N	G	I	K	V	I	.	.	.	.	.	.	.	.	.	D	D	E	E	V	K	R	L	I	R	E	L	D	I	A	D	V	P	G	I	G	N	I	T	A	E	K	L	K	K	L	G	I	N	K	L	V	D	T	L	S	I	E	F	D
Template Known Secondary structure							S	S													S	S						.	.	.	.	.	.	.	.	.												S		T	T	S	S	T	T											T	T	T			S	T	T	T	T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		K	L	K	G	.	.	M	I	G	E	A	K	A	K	Y	L	I	S	L	A	R
Template Known Secondary structure						.	.															T
Template Predicted Secondary structure						.	.
Template SS confidence
		212	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions