Job Description P0AFF6 Confidence 97.37% Date Thu Jan 5 11:26:07 GMT 2012 Rank 80 Aligned Residues 92 % Identity 13% Template c1kdhA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna Resolution 3.00 Å

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		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	.	N	A	L	A	T	I	A	Q	A	Q	E	E	S	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D
Query Conservation																										.
Alig confidence																										.																			.	.
Template Conservation																																													.	.
Template Sequence		S	M	K	D	T	E	G	I	P	C	L	G	D	K	V	K	S	I	I	E	G	I	I	E	D	G	E	S	S	E	A	K	A	V	L	N	D	E	R	Y	K	S	F	.	.	K	L	F	T	S	V	F	G	V	G	L	K	T	A	E	K	W	F	R	M	G	F	R	T	L	S	K	I	Q	S	D	K	S	L	R
Template Known Secondary structure		S	G	G	G	G	T	T		S	S																S	S																	.	.					T	S	T	T												T	T			S								S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	I	E	G	L	T	D	E	K	A	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	Q	M	Q	K	A	G	F	L	Y	Y	E	D	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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