 |
| Job Description | P0AFF6 | | Confidence | 65.65% | Date | Thu Jan 5 11:26:07 GMT 2012 |
| Rank | 224 | Aligned Residues | 53 |
| % Identity | 13% | Template | c1jihA_ |
| PDB info |
PDB header:translation | Chain: A: PDB Molecule:dna polymerase eta; |
PDBTitle: yeast dna polymerase eta
|
| Resolution | 2.25 Å |
|
| | |
434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 480 | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|  | | | | | | | | | . | . | . | . | . | . | . |
|
|
|
|
| | | | | | |
|
| | | | | | |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | L | N | L | E | G | V | D | R | D | L | A | F | K | L | A | A | . |
. |
. |
. |
. |
. |
. |
R | G | V | C | T | L | E | D | L | A | E | Q | G | I | D | D | L | A | D | I | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | D | E | K | A | G | A | L | I | M | A | A | R |
| Query Conservation | |
|
|
|
| | |
|
| | | |
| | |
|
|
| . | . | . | . | . | . | . | | | | |
|
|
|
|
|
| |
|
| |
|
|
| | |
| |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| | | |
| |
|
|
| | |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
| |
|
|
| |
| | | |
|
| | | |
| | | | | | |
|
| |
|
| |
|
| | | | | | | |
| | | | |
| | | | | | | | | | | | | | | | | | | | | | | |
| | |
| | | |
| |
| Template Sequence | |
I | T | S | F | W | T | L | G | G | V | L | G | K | E | L | I | D | V | L | D | L | P | H | E | N | S | I | K | H | I | R | E | T | W | P | D | N | A | G | Q | L | K | E | F | L | D | A | K | V | K | Q | S | D | Y | D | R | S | T | S | N | I | D | P | L | K | T | A | D | L | A | E | K | L | F | K | L | S | R |
| Template Known Secondary structure | |
G | G | G | S | G | G | G | S | S | | | | | | | | | | T | T |
|
| S | S | S | | | | | | | | | S |
| S |
| | | | | | | | | | | | | T | S | T | T |
|
| T | T | T |
| S | S |
| T | T |
| | | | | | | | | | | | T | T |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
| | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
| | | | | |
|
|
| | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
