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Job Description | P0AFF6 | Confidence | 95.78% | Date | Thu Jan 5 11:26:07 GMT 2012 |
Rank | 110 | Aligned Residues | 81 |
% Identity | 26% | Template | c1j4wA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:fuse binding protein; |
PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene
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Resolution | UNK |
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248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | G | A | C | V | G | M | R | G | A | R | V | Q | A | V | S | T | E | L | G | G | E | R | I | D | I | V | L | W | D | D | N | P | A | Q | F | V | I | N | A | M | A | P | A | D | V | A | S | I | V | V | D | E | D | K | . |
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H | T | M | D | I | A | V | E | A |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | G | I | V | I | G | R | N | G | E | M | I | K | K | I | Q | N | D | A | . |
G | V | R | I | Q | F | K | P | D | D | G | T | . |
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T | P | E | R | I | A | Q | I | T | G | P | P | D | R | A | Q | H | A | A | E | I | I | T | D | L | L | R | S | V | Q | Q | E | F | N | F | I | V | P | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
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. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
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312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | N | L | A | Q | A | I | G | R | N | G | Q | N | V | R | L | A | S | Q | L | S | G | W | E | L | N | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | K | T | G | L | I | I | G | K | G | G | E | T | I | K | S | I | S | Q | Q | S | G | A | R | I | E | L |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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