Return to main results Retrieve Phyre Job Id

Job DescriptionP00811
Confidence99.17%DateThu Jan 5 10:56:54 GMT 2012
Rank44Aligned Residues225
% Identity23%Templated3beca2
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50 .........60.........70.........80.........90.........100..... ....110
Predicted Secondary structure 


..






















.......

Query SS confidence 










. .






















































. . . . . . .




Query Sequence  KIPGMAVAVIY. . QGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPT. . . . . . . TKYWP
Query Conservation    

 

 
  .. 
  
    
  
       
  
 
 
 



  

  
  


 
 
 

  
.......  


Alig confidence 










..







............


































.......




Template Conservation     
 
  


  

  
   ............
       

  

  
  

  
  
 
 
   
 
          
Template Sequence  QIDAESYILIDYNSGKVLAEQ. . . . . . . . . . . . NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNP
Template Known Secondary structure 


TTT

............STT

B

GGGTTS

TT


GGG
GGG
G
Template Predicted Secondary structure 








............





















Template SS confidence 















































































   14.....20.........30.... .....40.........50.........60.........70.........80.
 
   111... .....120..... ....130.........140.........150.........160.........170.........180.
Predicted Secondary structure 



......






...




























Query SS confidence 



. . . . . .










. . .























































Query Sequence  ELTA. . . . . . KQWNGITLLHL. . . ATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKP
Query Conservation      ......     



 
...






                           

    


    


 


 
Alig confidence 



......










...





....................................










.

Template Conservation              
   

 


  

  

....................................
 

  
   
.

Template Sequence  VFKGSSLMFLKPGMQVPVSQLIRGINLQSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NDACVAMADFA. AG
Template Known Secondary structure  GGTTS





TT


.....................................S
Template Predicted Secondary structure 














....................................
.

Template SS confidence 















































































   82.......90.........100.........110. ........120.. ..
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  SGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINE
Query Conservation 

          
  



  
              
                 



 

  


      
       
Alig confidence 











.















.......................



























Template Conservation      
   

  .
  

   
      
.......................
    
 


 


 
   
        
Template Sequence  SQDAFVGLMNSY. VNALGLKNTHFQTVHG. . . . . . . . . . . . . . . . . . . . . . . LDADGQYSSARDMALIGQALIRDVPNEY
Template Known Secondary structure  S.TT
SS
B
SSSSS.......................SS
TT
BB

Template Predicted Secondary structure 
.









.......................









Template SS confidence 















































































   125....130...... ...140.........150.. .......160.........170.........180
 
   262.......270.........280.........290.........300.........310.........320.........330...... ...340
Predicted Secondary structure 


























































.
Query SS confidence 










































































.



Query Sequence  KTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATG. GFGS
Query Conservation                        
 
                                            
 
   .
  
Alig confidence 



















.....................................

















.



Template Conservation                    
 .....................................

      
 
 


    

  
Template Sequence  SIYKEKEFTFNGIRQLNRNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LLWDNSLNVDGIKTGHTDKAGYN
Template Known Secondary structure  GGGG

TT
S
G.....................................GGG
TTS
TTT
Template Predicted Secondary structure 




.....................................












Template SS confidence 















































































   181........190.........200 .........210.........220...
 
   341........350.........360.........370....
Predicted Secondary structure 









Query SS confidence 

































Query Sequence  YVAFIPEKELGIVMLANKNYPNPARVDAAWQILN
Query Conservation       

    



 
              

 
Alig confidence 

































Template Conservation   
      
   
 


       
  
   
 
Template Sequence  LVASATEGQMRLISAVMGGRTFKGREAESKKLLT
Template Known Secondary structure  TTSS
Template Predicted Secondary structure 





Template SS confidence 

































   224.....230.........240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions