|   |
40 | . | . | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 110 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |
|
|
Query SS confidence |   |
|
|
|
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|
|
|
|
|
|
| . |
. |
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|
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|
| . |
. |
. |
. |
. |
. |
. |
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|
|
Query Sequence |   |
K | I | P | G | M | A | V | A | V | I | Y | . |
. |
Q | G | K | P | Y | Y | F | T | W | G | Y | A | D | I | A | K | K | Q | P | V | T | Q | Q | T | L | F | E | L | G | S | V | S | K | T | F | T | G | V | L | G | G | D | A | I | A | R | G | E | I | K | L | S | D | P | T | . |
. |
. |
. |
. |
. |
. |
T | K | Y | W | P |
Query Conservation |   |
  |   |
|
|   |
|
|   |
|   |   | . | . |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
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|   |   |
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|   |   |
|   |   |
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|   |
|   |
|   |
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|   |   |
| . | . | . | . | . | . | . |   |   |
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|
Alig confidence |   |
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|
| . | . |
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|
| . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | I | D | A | E | S | Y | I | L | I | D | Y | N | S | G | K | V | L | A | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | D | V | R | R | D | P | A | S | L | T | K | M | M | T | S | Y | V | I | G | Q | A | M | K | A | G | K | F | K | E | T | D | L | V | T | I | G | N | D | A | W | A | T | G | N | P |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | S | T | T |
|
| B |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| T | T |
|  |  |  |
|
| G | G | G |
| G | G | G |
| G |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |
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|
Template SS confidence |   |
|
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  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
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. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
111 | . | . | . | |
|
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|
|
. | . | . | . | . | 120 | . | . | . | . | . | |
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . |
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|  |  |  |  | . | . | . |  |
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|  |  |  |  |  |  |  |  |  |
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|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
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|
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| . |
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. |
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|
Query Sequence |   |
E | L | T | A | . |
. |
. |
. |
. |
. |
K | Q | W | N | G | I | T | L | L | H | L | . |
. |
. |
A | T | Y | T | A | G | G | L | P | L | Q | V | P | D | E | V | K | S | S | S | D | L | L | R | F | Y | Q | N | W | Q | P | A | W | A | P | G | T | Q | R | L | Y | A | N | S | S | I | G | L | F | G | A | L | A | V | K | P |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|
|
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|   |
| . | . | . |
|
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
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|
|   |   |   |   |
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|   |
|
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|   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
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|
| . | . | . |
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|   |   |   |
| . |
|
|
Template Sequence |   |
V | F | K | G | S | S | L | M | F | L | K | P | G | M | Q | V | P | V | S | Q | L | I | R | G | I | N | L | Q | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | D | A | C | V | A | M | A | D | F | A | . |
A | G |
Template Known Secondary structure |   |
G | G | T | T | S |
|
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
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|
. | . | . | . | . | . | . | . | 120 | . | . | |
. | . |
  |
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
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|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
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|
Query Sequence |   |
S | G | L | S | F | E | Q | A | M | Q | T | R | V | F | Q | P | L | K | L | N | H | T | W | I | N | V | P | P | A | E | E | K | N | Y | A | W | G | Y | R | E | G | K | A | V | H | V | S | P | G | A | L | D | A | E | A | Y | G | V | K | S | T | I | E | D | M | A | R | W | V | Q | S | N | L | K | P | L | D | I | N | E |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
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| . |
|
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |   | . |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
S | Q | D | A | F | V | G | L | M | N | S | Y | . |
V | N | A | L | G | L | K | N | T | H | F | Q | T | V | H | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | A | D | G | Q | Y | S | S | A | R | D | M | A | L | I | G | Q | A | L | I | R | D | V | P | N | E | Y |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |
| S | S |
| B |
| S | S | S | S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
| T | T |
| B | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|
|  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
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|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
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|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
  |   |
262 | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
. | . | . | 340 |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
|
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|  |  |  |
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|
|
|  |  |  |  |
|
|
|
|
| . |
|  |  |  |
Query SS confidence |   |
|
|
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| . |
|
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|
Query Sequence |   |
K | T | L | Q | Q | G | I | Q | L | A | Q | S | R | Y | W | Q | T | G | D | M | Y | Q | G | L | G | W | E | M | L | D | W | P | V | N | P | D | S | I | I | N | G | S | D | N | K | I | A | L | A | A | R | P | V | K | A | I | T | P | P | T | P | A | V | R | A | S | W | V | H | K | T | G | A | T | G | . |
G | F | G | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | I | Y | K | E | K | E | F | T | F | N | G | I | R | Q | L | N | R | N | G | . |
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L | L | W | D | N | S | L | N | V | D | G | I | K | T | G | H | T | D | K | A | G | Y | N |
Template Known Secondary structure |   |
G | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
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. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
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341 | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | V | A | F | I | P | E | K | E | L | G | I | V | M | L | A | N | K | N | Y | P | N | P | A | R | V | D | A | A | W | Q | I | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | V | A | S | A | T | E | G | Q | M | R | L | I | S | A | V | M | G | G | R | T | F | K | G | R | E | A | E | S | K | K | L | L | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
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