Job Description P00811 Confidence 97.13% Date Thu Jan 5 10:56:54 GMT 2012 Rank 74 Aligned Residues 194 % Identity 16% Template c3ue3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:septum formation, penicillin binding protein 3, PDBTitle: crystal structure of acinetobacter baumanni pbp3 Resolution 2.30 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	I	N	D	I	V	H	R	T	I	T	P	L	I	E	Q	Q	K	I	P	G	M	A	V	A	V	I	Y	.	.	Q	G	K	P	Y	Y	F	T	.	.	.	.	.	.	.	.	.	.	W	G	Y	A	D	I	A	K	K	Q	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	T	G	V	L
Query Conservation																															.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	L	Q	Y	I	M	Y	R	E	L	T	A	A	G	V	A	N	N	A	R	S	A	T	A	I	A	V	D	V	K	T	G	E	I	L	A	M	T	S	W	P	S	Y	N	P	N	D	K	G	G	L	S	N	K	D	A	M	R	N	R	G	A	I	D	M	F	E	P	G	S	T	M	K	P	F	T	V	A	A
Template Known Secondary structure																			T	T		S									T	T	T		B								S				T	T			S	S							S	S								B			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		G	G	D	A	I	A	R	G	E	I	K	L	S	D	P	T	T	K	Y	W	P	E	L	T	.	.	.	.	.	.	.	.	A	K	Q	W	N	G	I	T	L	L	H	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	K	S	S	S	D	L	L	R	F	Y	Q	N	W	Q	P	A	W	A	P	G
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence				.	.	.																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	.	.	.	E	S	G	Q	Y	T	P	N	S	I	V	N	T	A	P	G	T	M	R	L	G	W	H	T	I	R	D	T	H	N	Y	G	A	L	T	L	T	G	I	I	V	K	S	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.		T	T	S			T	T						T	T	S					T	T						S	S														T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		346	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	R	L	Y	A	N	S	S	I	G	L	F	G	A	L	A	V	K	P	S	G	L	S	F	E	Q	A	M	Q	T	R	V	F	Q	P	L	K	L	N	H	T	W	I	N	V	P	P	A	E	E	K	N	Y	A	W	G	Y	R	E	G	K	A	V	H	V	S	P	G	A	L	D	A	E	A	Y	G	V	K	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																																						.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	G	S	A	K	L	A	L	S	L	P	K	E	A	L	P	S	F	F	R	R	.	.	.	.	.	A	G	F	G	Q	S	S	D	V	K	F	P	G	E	S	A	G	L	L	Y	S	A	D	K	L	N	S	S	Q	L	G	T	M	A	Y	G	Y	.	.	.	G	L	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										S		T	T									.	.	.	.	.	T	T	T	T	S			T	T			T	T					B				G	G	G										T	T	T		.	.	.	S	S	B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																																						.	.	.
Template SS confidence
												393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.						.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450				.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	E	D	M	A	R	W	V	Q	S	N	L	K	P	L	D	I	N	E	K	T	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	L	Q	L	A	Q	G	Y	A	M	L	A	N	H	G	V	E	M	P	L	S	L	H	K
Template Known Secondary structure														T	T	T	T						B	S	B
Template Predicted Secondary structure
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions