 |
Job Description | P00811 | Confidence | 63.00% | Date | Thu Jan 5 10:56:54 GMT 2012 |
Rank | 102 | Aligned Residues | 66 |
% Identity | 15% | Template | c3ss4C_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:glutaminase c; |
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
|
Resolution | 2.85 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | A | A | P | Q | Q | I | N | D | I | V | H | R | T | I | T | P | L | I | E | Q | Q | K | I | P | G | M | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | A | V | I | Y | . |
Q | G | K | P | Y | Y | F | T | W | G | Y | A | D | I | A | K | K | Q | P | V | T | Q | Q | T | L | F | E | L | G | S | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   | . |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
V | I | P | D | F | M | S | F | T | S | H | I | D | E | L | Y | E | S | A | K | K | Q | S | G | G | K | V | A | D | Y | I | P | Q | L | A | K | F | S | P | D | L | W | G | V | S | V | C | T | V | D | G | Q | R | H | S | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | T | K | V | P | F | C | L | Q | S | C |
Template Known Secondary structure |   |
S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| S | B |
|
|
| S | S |  |  |  |  | S | S |
| T | T |
|
|  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | S |
| S |
|
|  |  |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 290 | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | T | F | T | G | V | L | G | G | D | A | I |
Query Conservation |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|
|
|   |   |   |
Template Sequence |   |
V | K | P | L | K | Y | A | I | A | V | N | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|