Job Description P00811 Confidence 99.02% Date Thu Jan 5 10:56:54 GMT 2012 Rank 52 Aligned Residues 242 % Identity 16% Template c3qhyA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:beta-lactamase; PDBTitle: structural, thermodynamic and kinetic analysis of the picomolar2 binding affinity interaction of the beta-lactamase inhibitor protein-3 ii (blip-ii) with class a beta-lactamases Resolution 2.06 Å

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		29	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		H	R	T	I	T	P	L	I	E	Q	Q	.	K	I	P	G	M	A	V	A	V	I	Y	Q	G	K	P	Y	Y	F	T	W	G	Y	A	D	I	A	K	K	Q	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	T	G	V	L	G	G	D	A	I	A	R	G	E	I	K	L	S	D	P	T	T	K
Query Conservation													.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	E	F	S	Q	L	E	K	K	F	D	A	R	L	G	V	Y	A	I	D	T	G	T	N	Q	T	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	P	N	E	R	F	A	F	A	S	T	Y	K	A	L	A	A	G	V	L	L	Q	Q	N	S	T	K	K	L	D	E	V	I	T	Y	T	K
Template Known Secondary structure													T										T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T						G	G	G													S		G	G	G	G	G	S						G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		108	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		Y	W	P	E	L	.	.	.	.	.	T	A	K	Q	W	N	G	I	T	L	L	H	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	K	S	S	S	D	L	L	R	F	Y	Q	N	W	Q	P	A	W	A	P	G	T	Q	R	L	Y	A	N	S	S	I	G	L	F	G	A	L	A	V	K	P	S
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		E	D	L	V	D	Y	S	P	V	T	E	K	H	V	D	T	G	M	T	L	G	E	I	A	E	A	A	V	R	Y	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	G	N	I	L	F	H	K	I	.	.	.	.
Template Known Secondary structure		G	G			S	S		T	T	T	T	T	S	T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																																		.	.	.	.	.	.	.	.	140	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	F	E	Q	A	M	Q	T	R	V	F	Q	P	L	K	L	N	H	T	W	I	N	V	P	P	A	E	E	K	N	Y	A	W	G	Y	R	E	G	K	A	V	H	V	S	P	G	A	L	D	A	E	A	Y	G	V	K	S	T	I	E	D	M	A	R	W	V	Q	S	N	L	K	P	L	D	I	N	E	K
Query Conservation
Alig confidence		.	.									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	G	P	K	G	Y	E	K	.	A	L	R	Q	M	G	D	R	V	T	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	F	E	T	E	L	N	E	A	I	P	G	D	I	R	D	T	S	T	A	K	A	I	A	T	N	L	K	A	F	T	A	G	N	A	L	P	N	H
Template Known Secondary structure		.	.	T								.					T	T			S		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G				T	T			T	T																	S	S	S	S
Template Predicted Secondary structure		.	.									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				143	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.																		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		T	L	Q	Q	G	I	Q	L	A	Q	S	R	Y	W	Q	T	G	D	M	Y	Q	G	L	G	W	E	M	L	D	W	P	V	N	P	D	S	I	I	N	G	S	D	N	K	I	A	L	A	A	R	P	V	K	A	I	T	P	P	T	P	A	V	R	A	S	W	V	H	K	T	G	A	T	.	G	G	F	G	S	Y
Query Conservation																																																																											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	N	I	L	T	K	W	M	K	G	N	A	T	G	D	K	L	I	R	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	N	W	V	V	A	D	K	S	G	A	G	S	Y	G	T	R	N	D
Template Known Secondary structure											B	S		G	G	G	T	T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																																						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		342	.	.			.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.						.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure					.	.						.														.	.	.	.	.
Query SS confidence					.	.						.														.	.	.	.	.
Query Sequence		V	A	F	.	.	I	P	E	K	E	.	L	G	I	V	M	L	A	N	K	N	Y	P	N	.	.	.	.	.	P	A	R	V	D	A	A	W	Q	I	L	N	A	L	Q
Query Conservation					.	.						.														.	.	.	.	.
Alig confidence					.	.						.														.	.	.	.	.
Template Conservation
Template Sequence		I	A	I	V	W	P	P	N	R	A	P	I	I	I	A	I	L	S	S	K	D	E	K	G	A	T	Y	D	N	Q	L	I	A	E	A	A	E	V	I	V	N	A	F	R
Template Known Secondary structure								T	T	S												S	S	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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