Job Description P00811 Confidence 99.43% Date Thu Jan 5 10:56:54 GMT 2012 Rank 26 Aligned Residues 247 % Identity 15% Template c3p09A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	R	T	I	T	P	L	I	E	Q	Q	K	I	P	G	M	A	V	A	V	I	Y	Q	G	K	P	Y	Y	F	T	W	G	Y	A	D	I	A	K	K	Q	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	T	G	V	L	G	G	D	A	I	A	R	G	E	I	K	L	S	D	P	T	T	K
Query Conservation
Alig confidence																.											.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																																					.
Template Conservation																.											.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																																					.
Template Sequence		L	D	D	S	F	K	N	L	E	N	K	Y	D	G	.	K	I	G	I	Y	T	L	N	T	N	.	.	.	.	.	.	I	K	Y	.	.	.	.	.	.	.	.	.	N	E	S	Y	H	F	P	I	C	S	V	F	K	F	L	L	V	G	A	I	L	D	Y	D	X	H	N	Q	G	F	L	D	K	K	I	P	.
Template Known Secondary structure															S	.											.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	S	T	T	S					G	G	G																S	T	T	G	G	G					.
Template Predicted Secondary structure																.											.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.							.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	P	E	L	T	A	K	Q	W	N	G	I	T	L	L	H	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	K	S	S	S	D	L	L	R	F	Y	Q	N	W	Q	P	A	W	A	P	G	T	Q	R	L	Y	A	N	S	S	I	G	L	F	G	A	L	A	V	K	P	S	G	L	S	F	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	N	Q	D	D	I	G	K	L	G	Y	A	P	I	T	A	K	N	V	G	K	T	L	T	I	S	Q	L	N	Y	A	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	S	P	A	S	N	I	L	V	R	E	L	G	G	.	.	.	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.							T	T					T	T	G	G	G		T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T		.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
														88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	M	Q	T	R	V	F	Q	P	L	K	L	N	H	T	W	I	N	V	P	P	A	E	E	K	N	Y	A	W	G	Y	R	E	G	K	A	V	H	V	S	P	G	A	L	D	A	E	A	Y	G	V	K	S	T	I	E	D	M	A	R	W	V	Q	S	N	L	K	P	L	D	I	N	E	K	T	L	Q	Q	G
Query Conservation
Alig confidence							.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	L	N	K	.	F	I	K	K	L	G	D	N	D	T	I	I	T	A	D	E	P	E	I	N	Y	T	Q	P	H	S	N	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	T	P	K	A	I	T	K	D	I	Y	K	L	A	F	G	N	I	L	D	K	K	H	K	D	I	F
Template Known Secondary structure							.					T	T			S		B					T	T	G	G	G				T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S	S	S	S
Template Predicted Secondary structure							.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		I	Q	L	A	Q	S	R	Y	W	Q	T	G	D	M	Y	Q	G	L	G	W	E	M	L	D	W	P	V	N	P	D	S	I	I	N	G	S	D	N	K	I	A	L	A	A	R	P	V	K	A	I	T	P	P	T	P	A	V	R	A	S	W	V	H	K	T	G	A	T	G	G	.	.	.	F	G	S	Y	V	A	F
Query Conservation																																																																								.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	Y	L	Q	D	N	N	T	G	A	N	R	I	A	F	S	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	D	W	I	I	G	D	K	T	G	T	C	G	Q	Y	A	A	T	N	D	V	A	I	I
Template Known Secondary structure										T	T	T	T	T	G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										S	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																																						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		345	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure					.	.															.	.	.	.	.	.
Query SS confidence					.	.															.	.	.	.	.	.
Query Sequence		I	P	E	.	.	K	E	L	G	I	V	M	L	A	N	K	N	Y	P	.	.	.	.	.	.	N	P	A	R	V	D	A	A	W	Q	I	L	N	A	L
Query Conservation					.	.															.	.	.	.	.	.
Alig confidence					.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		W	P	K	N	Q	Q	P	I	A	L	G	I	L	Y	T	N	P	N	D	K	N	A	P	S	N	E	E	I	I	Q	Q	A	A	K	L	I	A	N	D	L
Template Known Secondary structure				T	T	S												T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions