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Job DescriptionP00811
Confidence99.10%DateThu Jan 5 10:56:54 GMT 2012
Rank49Aligned Residues246
% Identity14%Templatec3cg5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the covalent adduct formed between tb2 b-lactamase and clavulanate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.. .......50.........60.........70.........80.........90.........100......
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Query Sequence  VHRTITPLIEQQKIP. GMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTT
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Template Sequence  LADRFAELERRYDARLGVYVPATGTTAAIEY. . . . . . . . . . . . . RADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYT
Template Known Secondary structure  TT



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GGGGS
GGGGG



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   44.....50.........60.........70.... .....80.........90.........100.........110
 
   107..110...... ...120.........130.........140.........150.........160.........170.........180.
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Query Sequence  KYWPELTAKQ. . . . . WNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKP
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Template Sequence  SDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TAANLLLADL
Template Known Secondary structure  GGG

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TTTTT
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   111........120.........130.........140.... .....150....
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  SGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINE
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Template Sequence  GGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERD. . . . . . . . . . . . . . . . . TTTPHAIALVLQQLVLGNALPP
Template Known Secondary structure 
SGGGGTT

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TTGGG


TT

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   155....160.........170.........180.........190..... ....200.........210.......
 
   262.......270.........280.........290.........300.........310.........320.........330...... ...340
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Query Sequence  KTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATG. GFGS
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Template Sequence  DKRALLTDWMARNTTGAKRIRAGF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PADWKVIDKTGTGDYGRAN
Template Known Secondary structure  T
SS
TTTS.....................................
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   218.220.........230.........240. ........250.........260
 
   341.... ....350.........360.. .......370......
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Query Sequence  YVAFI. . . PEKELGIVMLANKNYPN. . . . . . . PARVDAAWQILNAL
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Template Sequence  DIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVL
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TTS

GGG
TT



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   261........270.........280.........290.........300......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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