Job Description P00811 Confidence 99.38% Date Thu Jan 5 10:56:54 GMT 2012 Rank 30 Aligned Residues 254 % Identity 15% Template c2wuqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi Resolution 1.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		D	I	V	H	R	T	I	T	P	L	I	E	Q	Q	K	I	P	G	M	A	V	A	V	.	I	Y	Q	G	K	P	Y	Y	F	T	W	G	Y	A	D	I	A	K	K	Q	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	T	G	V	L	G	G	D	A	I	A	R	G	E	I	K	L	S	D	P
Query Conservation																									.
Alig confidence																									.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	L	L	R	E	L	R	D	A	L	H	E	G	G	L	T	G	S	F	L	V	R	D	L	Y	T	G	E	E	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	T	E	L	P	T	A	S	L	V	K	L	P	L	A	L	A	T	L	E	R	I	R	L	G	E	V	D	G	A	Q	Q
Template Known Secondary structure															T	T										T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T						G	G	G	G														T	T	S	S		T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	K	Y	W	P	E	L	T	A	K	Q	W	N	G	I	T	L	L	H	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	K	S	S	S	D	L	L	R	F	Y	Q	N	W	Q	P	A	W	A	P	G	T	Q	R	L	Y	A	N	S	S	I	G	L	F	G	A	L	A	V	K	P	S	G	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	A	P	G	R	I	T	T	P	G	P	T	G	L	S	R	F	R	H	P	A	R	V	A	V	D	D	L	L	Y	L	S	T	S	V	S	.	.	.	.	.	.	.	.	.	.	.	D	G	T	A	S	D	A	L	F	E	I	T	.	.	.	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S			G	G	G	G		S	S																S		.	.	.	.	.	.	.	.	.	.	.												S	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		72														.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		S	F	E	Q	A	M	Q	T	R	V	F	Q	P	L	K	L	N	H	T	W	I	N	V	P	P	A	E	E	K	N	Y	A	W	G	Y	R	E	G	K	A	V	H	V	S	P	G	A	L	D	A	E	A	Y	G	V	K	S	T	I	E	D	M	A	R	W	V	Q	S	N	L	.	.	.	.	K	P	L	D	I	N
Query Conservation																																																																								.	.	.	.
Alig confidence		.								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation		.								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	P	A	Q	V	E	Q	.	M	V	R	E	W	G	F	R	D	L	T	V	R	H	S	M	R	E	H	R	V	P	Q	L	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	T	G	T	A	R	A	F	V	D	L	L	E	A	L	W	A	P	V	L	T	G	P	A	L	P
Template Known Secondary structure		.								.					T	T			S							T	T				S	G	G	G		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																	G	G	G
Template Predicted Secondary structure		.								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			122	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	L	Q	Q	G	I	Q	L	A	Q	S	R	Y	W	Q	T	G	D	M	Y	Q	G	L	G	W	E	M	L	D	W	P	V	N	P	D	S	I	I	N	G	S	D	N	K	I	A	L	A	A	R	P	V	K	A	I	T	P	P	T	P	A	V	R	A	S	W	V	H	K	T	G	A	T	G	G	F	G	S
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	P	A	A	R	L	R	E	L	M	A	A	N	L	L	R	H	R	L	A	P	D	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	A	A	T	W	S	S	K	T	G	T	L	L	N	L	R	H
Template Known Secondary structure														T					S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T											T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																																						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		341	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.														.	.	.	.	.	.	.
Query SS confidence											.	.	.														.	.	.	.	.	.	.
Query Sequence		Y	V	A	F	I	P	E	K	E	.	.	.	L	G	I	V	M	L	A	N	K	N	Y	P	N	.	.	.	.	.	.	.	P	A	R	V	D	A	A	W	Q	I	L	N	A	L	Q
Query Conservation											.	.	.														.	.	.	.	.	.	.
Alig confidence											.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	G	V	V	E	H	A	D	G	Q	V	F	A	V	A	V	L	T	E	S	Q	V	P	A	D	S	Q	P	G	A	E	A	L	M	A	Q	V	A	R	R	L	R	D	R	L	R
Template Known Secondary structure									T	T	S												S	S			S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions