Job Description P00811 Confidence 84.75% Date Thu Jan 5 10:56:54 GMT 2012 Rank 90 Aligned Residues 108 % Identity 15% Template c2bg1A_ PDB info PDB header:peptidoglycan Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: active site restructuring regulates ligand recognition in2 classa penicillin-binding proteins (pbps) Resolution 1.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		P	Q	Q	I	N	D	I	V	H	R	T	I	T	P	L	I	E	Q	Q	K	I	P	G	M	A	V	A	V	I	Y	Q	.	.	G	K	P	Y	Y	F	T	W	G	Y	A	D	I	A	K	K	Q	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	T	G	V	L	G	G	D	A	I	A	R	G	E
Query Conservation																																	.	.
Alig confidence																																	.	.																																									.	.
Template Conservation																																																																											.	.
Template Sequence		H	S	A	M	Q	S	A	V	A	D	Y	G	Y	L	L	D	D	G	T	G	R	V	E	V	G	N	V	L	M	D	N	Q	T	G	A	I	L	G	F	V	G	G	R	N	Y	Q	E	N	Q	N	N	H	A	F	D	T	K	R	S	P	A	S	T	T	K	P	L	L	A	Y	G	I	A	.	.	I	D	Q	G	L
Template Known Secondary structure													G	G	G	G			S	S	S	S										T	T	T		B								S		T	T	T					T	T	T	T			B			G	G	G	G					T					.	.			T	T	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		I	K	L	S	D	P	T	T	K	Y	W	P	E	L	T	A	K	Q	.	.	.	.	.	.	.	.	.	W	N	G	I	T	L	L	H	L	A	T	Y	T	A
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	S	E	T	I	L	S	N	Y	P	T	N	F	A	N	G	N	P	I	M	Y	A	N	S	K	G	T	G	M	M	T	L	G	E	A	L	N	Y	S	W
Template Known Secondary structure				T	T						S			B		T	T	S		B			B	T	T	B															T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions