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Job DescriptionP0AAF6
Confidence100.00%DateWed Jan 25 15:20:21 GMT 2012
Rank23Aligned Residues226
% Identity30%Templatec3d31B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  IQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRR
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Template Sequence  IEIESLSRKWKNF. SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE. . . . . . . . KH
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   2.......10.... .....20.........30.........40.........50.........60.........70 ..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  NVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPQV
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Template Sequence  DIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKR. . . . VLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKI
Template Known Secondary structure  T

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   73......80.........90.........100....... ..110.........120.........130.........140........
 
   163......170.........180....... ..190.........200.........210.........220.........230 .........240
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Query Sequence  LLFDEPTAALDPEITAQIVSIIREL. AETNITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTE. PQTEAFKNYL
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Template Sequence  LLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKPVEGRVASFV
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   241
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Query Sequence  S
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Template Sequence  G
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   229
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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