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Job DescriptionP0AAF6
Confidence100.00%DateWed Jan 25 15:20:21 GMT 2012
Rank54Aligned Residues213
% Identity28%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLR
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Template Sequence  LVEYPRLVKDYGSFK. LEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDL. . . . . . . . . . . . . . . . . .
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   343......350....... ..360.........370.........380.........390.........400...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPQ
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Template Sequence  . TVAYKPQYIKAEYEGTVYELLSKIDSS. . . . . KLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDAD
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   404.....410.........420.........430 .........440.........450.........460.........470.......
 
   162.......170.........180.........190 .........200.........210..... ....220.........230........
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Query Sequence  VLLFDEPTAALDPEITAQIVSIIRELAET. NITQVIVTHEVEVARKTASRVVYME. . NGHIVEQGDASCFTEPQTEAFKN
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Template Sequence  IYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREGMNRFLAS
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   478.480.........490.........500.........510.........520.........530.........540.........550.......
 
   239
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Query Sequence  Y
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Template Sequence  V
Template Known Secondary structure  T
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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