Job Description P0AAF6 Confidence 100.00% Date Wed Jan 25 15:20:21 GMT 2012 Rank 41 Aligned Residues 229 % Identity 29% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		S	I	Q	L	N	G	I	N	C	F	Y	.	.	G	A	H	Q	A	L	F	D	I	T	L	D	C	P	Q	G	E	T	L	V	L	L	G	P	S	G	A	G	K	S	S	L	L	R	V	L	N	L	L	E	M	P	R	S	G	T	L	N	I	A	G	N	H	F	D	F	T	K	T	P	S	D	K	A	I	R	D
Query Conservation													.	.
Alig confidence													.	.																																																							.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		D	V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	.	.	.	.	.	.	R	E	Y	T	L	A	S
Template Known Secondary structure						S	S		B		B		S	S	S	S		B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S			B	S	S					S	S	S	B	T	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.							.	.	410	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		L	R	R	N	V	G	M	V	F	Q	Q	Y	N	L	W	P	H	L	T	V	Q	Q	N	L	I	E	A	P	C	R	V	L	G	L	S	K	D	Q	A	L	A	R	A	E	K	L	L	E	R	.	.	.	.	.	L	R	L	K	P	Y	S	D	R	Y	P	L	H	L	S	G	G	Q	Q	Q	R	V	A	I	A	R
Query Conservation																																																			.	.	.	.	.
Alig confidence																			.																																.	.	.	.	.
Template Conservation																			.
Template Sequence		L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	.	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q	R	Q	R	I	A	I	A	R
Template Known Secondary structure				T	T						S						S	S	.		B	S	T	T	T	T	S	S	S	S	T	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T	S		S	S										T
Template Predicted Secondary structure																			.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	M	E	P	Q	V	L	L	F	D	E	P	T	A	A	L	D	P	E	I	T	A	Q	I	V	S	I	I	R	E	L	A	E	T	N	I	T	Q	V	I	V	T	H	E	V	E	V	A	R	K	T	A	S	R	V	V	Y	M	E	N	G	H	I	V	E	Q	G	D	A	S	C	F	T	E	P	Q	T	E
Query Conservation
Alig confidence																																					.															.
Template Conservation																																					.															.
Template Sequence		A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	Q	K	.	N	R	T	S	L	V	I	A	H	R	L	S	T	I	.	E	K	A	D	E	I	V	V	V	E	D	G	V	I	V	E	R	G	T	H	N	D	L	L	E	H	R	G	V
Template Known Secondary structure				T	S			S							T	T	S	S									T	T					T	T	T	S	.	S	S							S	S	G	G	G	T	.	T	T		S	S	B					T	T							S	S	S					S		S	S
Template Predicted Secondary structure																																					.															.
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.		.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		235	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	Q	L	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		572	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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