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25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
C | P | Q | G | E | T | L | V | L | L | G | P | S | G | A | G | K | S | S | L | L | R | V | L | N | L | L | E | M | P | R | S | G | T | L | N | I | A | G | N | H | F | D | F | T | K | T | P | S | D | K | A | I | R | D | L | R | R | N | V | G | M | V | F | Q | Q | Y | N | L | W | P | H | L | T | V | Q | Q | N | L | I |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
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|   |
Alig confidence |   |
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| . | . | . | . | . | . |
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| . | . | . | . |
Template Conservation |   |
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|   |   |   |   |
|   |
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|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Template Sequence |   |
I | P | Q | G | F | F | I | A | L | T | G | E | P | G | T | G | K | T | I | F | S | L | H | F | I | A | K | G | L | R | D | G | D | P | C | I | Y | V | T | T | E | E | . |
. |
. |
. |
. |
. |
S | R | D | S | I | I | R | Q | A | K | Q | F | N | W | D | F | E | E | Y | I | E | K | K | L | I | I | I | D | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | S | S | S | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |
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|
| G | G | G | B | T | T | T |  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  | . | . | . | . |
Template SS confidence |   |
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  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
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. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
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  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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| . | . |
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|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
E | A | P | C | R | V | L | G | L | S | K | D | Q | A | L | A | R | A | E | K | L | L | E | R | L | R | L | K | P | Y | S | D | R | Y | P | L | H | L | S | G | G | Q | Q | Q | R | V | A | I | A | R | A | L | M | M | E | P | Q | V | L | L | F | D | E | P | T | . |
. |
A | A | L | D | P | E | I | T | A | Q | I | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
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| . | . |   |
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|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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. |
. |
. |
A | L | M | D | Q | W | S | L | V | N | L | T | P | E | E | L | V | N | K | V | I | E | A | K | Q | K | L | G | Y | G | K | A | R | L | V | I | D | S | V | S | A | L | F | L | D | K | P | A | M | A | R | K | I | S | Y |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| T | T | B |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  | T | G | G | G | G | S | S | S |
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
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90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
  |   |
183 | . | . | . | . | . | . | 190 | |
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
I | I | R | E | L | A | E | T | . |
N | I | T | Q | V | I | V | T | H | E | V | E | V | A | R | K | T | A | S | R | V | V | Y | M | E |
Query Conservation |   |
  |
|   |   |   |   |   |   | . |
|   |
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|   |
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|   |   |   |   |
|   |   |   |   |
|   |
|   |
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|   |
Alig confidence |   |
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| . |
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| . | . | . |
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Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |
|
|   |
|   |
Template Sequence |   |
Y | L | K | R | V | L | N | K | W | N | F | T | I | Y | A | T | S | Q | G | V | E | . |
. |
. |
H | V | A | D | G | I | I | R | F | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|  |  | . | . | . |  |  |
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . |  |  |
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|  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
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170 | . | . | . | . | . | . | . | . | . |
  |