Job Description P0AAF6 Confidence 98.17% Date Wed Jan 25 15:20:21 GMT 2012 Rank 105 Aligned Residues 162 % Identity 17% Template c2q6tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	Q	G	E	T	L	V	L	L	G	P	S	G	A	G	K	S	S	L	L	R	V	L	N	L	L	E	M	P	R	S	G	T	L	N	I	A	G	N	H	F	D	F	T	K	T	P	S	D	K	A	I	R	D	L	R	R	N	V	G	M	V	F	Q	Q	Y	N	L	W	P	H	L	T	V	Q	Q	N	L	I
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Sequence		L	G	P	G	S	L	N	I	I	A	A	R	P	A	M	G	K	T	A	F	A	L	T	I	A	Q	N	A	A	L	K	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	I	Y	S	.	.	.	.	.	.	L	E	M	P	A	A	Q	L	T	L
Template Known Secondary structure				T	T									T	T	S	S																S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																									.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		E	A	P	C	R	V	L	G	L	S	K	.	.	.	.	.	.	D	Q	A	L	A	R	A	E	K	L	L	E	R	L	R	L	K	P	Y	S	D	R	Y	P	L	H	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	M	M	E	P	Q	V	L	L	F	D	E	P	T	A	A	L	D	P	E	I	T	A
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	M	C	S	E	A	R	I	D	M	N	R	V	R	L	T	D	R	D	F	S	R	L	V	D	V	A	S	R	L	S	E	A	P	I	Y	I	D	D	T	P	D	L	T	L	M	E	V	R	A	R	A	R	R	L	V	S	Q	N	Q	V	G	L	I	I	I	D	Y	L	Q	L	M	S	G	P	N	R	Q	Q
Template Known Secondary structure								T	T			G	G	G	T																		T	T									T	T		B																									G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																				.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	V	S	I	I	R	E	L	A	.	.	.	.	E	T	N	I	T	Q	V	I	V	T	H	E	V	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	K	T	A	S	R	V	V	Y	M	E	N
Query Conservation												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	A	A	I	S	R	G	L	K	A	L	A	R	E	L	G	I	P	I	I	A	L	S	Q	L	S	R	A	V	E	A	R	P	N	K	R	P	M	L	S	D	L	R	E	S	G	S	I	E	Q	D	A	D	L	V	M	F	I	Y	R
Template Known Secondary structure																		T	S										G	G	G	G	S	S	S	S		S			G	G	G	G	G	G	G	S	S						S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions