Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAF6
Confidence100.00%DateWed Jan 25 15:20:21 GMT 2012
Rank9Aligned Residues231
% Identity39%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.. .......20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure  .


































Query SS confidence 










.



































































Query Sequence  SIQLNGINCFY. GAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDL
Query Conservation   
 
 

   
.     
  


 
  

   
 
 








  
 
   
  
 
   
                 
Alig confidence 










.



























































........
Template Conservation 

 
  

  
 
   

  


 
  

   


 








  
 

  
  
 
   
  
      ........
Template Sequence  TIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . . . . . . .
Template Known Secondary structure 


TTSTT

TT

STTSSTSS

STT
TT

GG........
Template Predicted Secondary structure 
































........
Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
Query Conservation     
    
        

 
 
                      
    
          

 
   

 

 

   
Alig confidence 

























.




















































Template Conservation                   

 


   .                  
               



  


 




   
Template Sequence  KRNVGLVFQNYALFQHMTVYDNVSFG. LREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRP
Template Known Secondary structure  GSSTT



TTS
TT.GGGTT

TT
GGGTTS
GGGS
TT

Template Predicted Secondary structure 











.

























Template SS confidence 















































































   86...90.........100.........110. ........120.........130.........140.........150.........160....
 
   161........170.........180....... ..190.........200.........210.........220........ .230........
Predicted Secondary structure 






.









.



Query SS confidence 


























.








































.









Query Sequence  QVLLFDEPTAALDPEITAQIVSIIREL. AETNITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF. TEPQTEAFKN
Query Conservation   







 


      
   
   .   
 


 


    
    
 
 

  
 

  
     .          
Alig confidence 


























.








































.









Template Conservation   






 
 

      
   
  
    
 


 



  
    



 

  
 

  
   

   
     
 
Template Sequence  QVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVAS
Template Known Secondary structure  SSTTTTS


S

STT
S
SS
Template Predicted Secondary structure 




















Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   239240.
Predicted Secondary structure 
Query SS confidence 


Query Sequence  YLS
Query Conservation   
 
Alig confidence 


Template Conservation    
Template Sequence  FIG
Template Known Secondary structure  SS
Template Predicted Secondary structure 
Template SS confidence 


   245..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions