Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAF6
Confidence99.73%DateWed Jan 25 15:20:21 GMT 2012
Rank65Aligned Residues99
% Identity19%Templatec1xexB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:smc protein; PDBTitle: structural biochemistry of atp-driven dimerization and dna2 stimulated activation of smc atpases.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150...... ...160.........170.........180.........190.........200....
Predicted Secondary structure 












....













Query SS confidence 



























. . . .















































Query Sequence  LRLKPYSDRYPLHLSGGQQQRVAIARAL. . . . MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVA
Query Conservation    
          

 
   

 

 

....   
 







 


      
   
      
 


 


    
Alig confidence 



























....
































.













Template Conservation 
            





  
 


 

        






   

      
   
  
  .  






     
Template Sequence  AKPAGKDVKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDQIDAHLDDANVKRVADLIKESSK. ESQFIVITLRDVMM
Template Known Secondary structure 
SSS

GGGS
S

SSS
SS

TT.TS
S
Template Predicted Secondary structure 


















.





Template SS confidence 















































































   1056...1060.........1070.........1080.........1090.........1100.........1110.........1120 .........1130....
 
   205....210.. ..... ..220.........
Predicted Secondary structure 

..

..

Query SS confidence 







. .




. .











Query Sequence  RKTASRVV. . YMENG. . HIVEQGDASCFT
Query Conservation      
 
 ..

  
.. 

  
      
Alig confidence  .






..




..











Template Conservation  .   
 
  
    
 
 
      
   
Template Sequence  . ANADKIIGVSMRDGVSKVVSLSLEKAMK
Template Known Secondary structure  .TT
S
TT
Template Predicted Secondary structure  .



Template SS confidence 




























   1135....1140.........1150.........1160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions