Job Description P77374 Confidence 95.23% Date Thu Jan 5 12:28:16 GMT 2012 Rank 47 Aligned Residues 162 % Identity 14% Template d2ji7a1 SCOP info DHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain Pyruvate oxidase and decarboxylase, middle domain Resolution 1.82

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	T	I	A	S	S	L	K	K	T	V	E	Q	Y	G	N	E	A	V	Y	I	Q	Y	S	S	G	I	V	G	G	N	M	T	R	S	S	P	S	A	S	A	V	K	R	L	M	N	C	Y	G	G	S	L	N	Q	Y	G	S	Y	S	T	A	Q	I	S	C	A	M	P	Y	T	Y	G	S	N	D
Query Conservation
Alig confidence															.	.	.	.	.	.												.	.	.	.	.	.																						.
Template Conservation															.	.	.	.	.	.												.	.	.	.	.	.																						.
Template Sequence		E	D	A	I	A	R	A	A	D	L	I	K	N	.	.	.	.	.	.	A	K	R	P	V	I	M	L	G	K	G	.	.	.	.	.	.	A	A	Y	A	Q	C	D	D	E	I	R	A	L	V	E	E	T	G	I	P	F	.	L	P	M	G	M	A	K	G	L	L	P	D	N	H	P	Q	S	A	A	A	T	R
Template Known Secondary structure														T	.	.	.	.	.	.		S	S									.	.	.	.	.	.				T	T													T				.				T	T	T	B	T	T	B		T	T		T	T	B		G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.												.	.	.	.	.	.																						.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		G	N	S	T	T	D	I	E	N	S	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	I	T	Y	L	L	E	K	A	R	E	K	S	N	A	K	M	I	V	I	D	P	R	Y	T	D	T	A	A	G	.	R	E	D	E	W	L	P	I	R	P	G	T	D	A	A	L	V	A	G	I	A
Query Conservation																																																												.
Alig confidence		.	.	.																															.	.	.	.	.	.																				.							.	.	.
Template Conservation		.	.	.																															.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	A	F	A	L	A	Q	C	D	V	C	V	L	I	G	A	R	L	N	W	L	M	Q	H	G	K	G	K	T	W	G	.	.	.	.	.	.	D	E	L	K	K	Y	V	Q	I	D	I	Q	A	N	E	M	D	S	N	Q	P	I	A	A	P	V	.	.	.	V	G	D	I	K	S	A	V	S	L	L	R
Template Known Secondary structure		.	.	.								S						S			S	S	G	G	G	G	G	G		S	G	G	G	T	.	.	.	.	.	.	T	S									S		G	G	G	T	T	S	S	S			S				.	.	.		S
Template Predicted Secondary structure		.	.	.																															.	.	.	.	.	.																											.	.	.
Template SS confidence
					267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	L	I	N	E	N	L	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	K	G	A	P	K	A	D	A	E	W	T	G	A	L	K	A	K	V	D	G	N	K	A	K	L
Template Known Secondary structure				T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions