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Job DescriptionP77374
Confidence100.00%DateThu Jan 5 12:28:16 GMT 2012
Rank24Aligned Residues543
% Identity24%Templated2iv2x2
SCOP infoFormate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3
Resolution2.27

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPD. . . . RLNYPMKRVGKRGEG
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Template Sequence  KKVVTVCPY. CASGCKINLVVDNGKIVRAEAA. . . . . QGKTNQGTLCLKGYYGWDFINDTQILTPRLKTPMIRR. . QRGG
Template Known Secondary structure 
SS.BTT

TT
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TTTTT


TTGGGG


SSS
B

S


..STTS
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   2.......10 .........20.........30.. .......40.........50.........60......... 70...
 
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Query Sequence  KFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLN. QYGSYSTAQISCAM
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Template Sequence  KLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSR. . . . . . GTGNETNYVMQKFARAVIGTNNVDCCARVHGPSVAGL
Template Known Secondary structure 




GGG

SS......TT
TT




SS



SSS
S
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Query Sequence  PYTYG. SNDGNSTTDIENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTD
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Template Sequence  HQSVGNGAMSNAINEIDNTDLVFVFGYNPADSHPIVANHVIN. . . . AKRNGAKIIVCDPRKIETAR. IADMHIALKNGSN
Template Known Secondary structure  S

S
SS
GGGGGG
SS


....TT

SS

.T
S


TT
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   149150.........160.........170.........180.........190 .........200.........210 .........220...
 
   284.....290.........300.........310.........320.........330.........340.........350.........360...
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Query Sequence  AALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDKTAKTPQWASQITGIPEDRIIKLARE
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Template Sequence  IALLNAMGHVIIEENLYDKAFVASRTEGFEE. . . . . . . . . . . . . . . . . . . YRKIVEGYTPESVEDITGVSASEIRQAARM
Template Known Secondary structure  TT
S

...................T

SGGG


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Query Sequence  IGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISC. . . . . . . .
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Template Sequence  YAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDPANRE
Template Known Secondary structure  SSSTTGGGSSSTT
SSSTT
S
SBTTTT
BTTGGGTT
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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   436...440.........450.........460.........470.........480.........490.........500.........510....
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Query Sequence  . FSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYAD
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Template Sequence  KFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQT. DAELSAVRKAF. . . EDLELVIVQDIFMTKTASAAD
Template Known Secondary structure  TT
S



S



GGGTTS

S

.SSS...SSSB

T
S
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Query Sequence  ILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLA
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Template Sequence  VILPSTSWGEHE. . . . GVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYP. . MHYNNTQEIWDELRHL. . . . . C
Template Known Secondary structure  B

BTTB
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TTS


S

SSS
B
TT

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   441........450.. .......460.........470.........480.........490.. .......500........ .
 
   595....600.........610.........620.........630.........640.......
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Query Sequence  KDPALPSYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSS
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Template Sequence  PDFYGATYEKMGELGFIQWPC. . RDTSDADQGTSYLFKEKFDTPNGLAQFFTC
Template Known Secondary structure  TTTTT

TTT

S

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SSTT

B
SSS
SS

SSTTS




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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