 |
Job Description | P77374 | Confidence | 39.42% | Date | Thu Jan 5 12:28:16 GMT 2012 |
Rank | 136 | Aligned Residues | 79 |
% Identity | 16% | Template | d1h2ka_ |
SCOP info | Double-stranded beta-helix
| Clavaminate synthase-like
| Hypoxia-inducible factor HIF ihhibitor (FIH1)
|
Resolution | 2.15 |
|
 |
  |   |
687 | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | |
. | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 740 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 750 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | L | F | G | F | H | Y | K | S | R | T | H | S | T | Y | G | N | I | D | L | L | K | A | A | C | R | . |
Q | E | V | W | I | N | P | I | D | A | Q | K | R | G | I | A | N | G | D | . |
. |
. |
. |
. |
. |
. |
M | V | R | V | F | N | H | R | . |
. |
. |
. |
. |
. |
. |
. |
G | E | V | R | L | P | A | K | V | T |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |   |
|
| . | . | . | . | . | . | . |   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
L | L | I | G | M | E | G | N | V | T | P | A | H | Y | D | E | Q | Q | N | F | F | A | Q | I | K | G | Y | K | R | C | I | L | F | P | P | D | Q | F | E | C | L | Y | P | Y | P | V | H | H | P | C | D | R | Q | S | Q | V | D | F | D | N | P | D | Y | E | R | F | P | N | F | Q | N | V | V | G | Y | E | T | V | V | G |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |
| B |
|
| T | T | S | T | T | T | T | B | B |
|
|
| T | T | S |
|
| T | T | T |
| G | G | G | G | G |
|
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
  |   |
751 | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | I | L | P | G | V | S | A | M | G | Q | G | A | W | H | E | A |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . |
|   |
|
|
|
|   |
|
|   |
|   |
|
Template Sequence |   |
P | G | . |
. |
. |
D | V | L | Y | I | P | M | Y | W | W | H | H | I |
Template Known Secondary structure |   |
T | T | . | . | . |
|  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
267 | . | |
|
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|