Job Description P77374 Confidence 73.07% Date Thu Jan 5 12:28:16 GMT 2012 Rank 96 Aligned Residues 152 % Identity 16% Template c2x7jA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis Resolution 2.35 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		D	E	A	L	D	T	I	A	S	S	L	K	K	T	V	E	Q	Y	G	N	E	A	V	Y	I	Q	Y	S	S	G	I	V	G	G	N	M	T	R	S	S	P	S	A	S	A	V	K	R	L	M	N	C	Y	G	G	S	L	N	Q	Y	G	S	Y	S	T	A	Q	I	S	C	A	M	P	Y	T	Y	G	S	.	.
Query Conservation																																																																																.	.
Alig confidence															.	.	.	.	.	.											.	.	.	.	.	.	.																																											.	.
Template Conservation															.	.	.	.	.	.											.	.	.	.	.	.	.
Template Sequence		R	E	S	L	S	D	V	A	E	M	L	A	E	.	.	.	.	.	.	A	E	K	G	M	I	V	C	G	E	.	.	.	.	.	.	.	L	H	S	D	A	D	K	E	N	I	I	A	L	S	K	A	L	Q	Y	P	I	L	A	D	P	L	S	N	L	R	N	G	V	H	D	K	S	T	V	I	D	A	Y	D
Template Known Secondary structure		T	G	G	G										.	.	.	.	.	.		S	S								.	.	.	.	.	.	.																		T							G	G	G	T	T	T	B	S	S	S			T	T
Template Predicted Secondary structure															.	.	.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
				211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	D	G	N	S	T	T	D	I	E	N	S	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	I	T	Y	L	L	E	K	A	R	E	K	S	N	A	K	M	I	V	I	D	P	R	Y	T	D	T	A	A	G	R	E	D	E	W	L	P	I	R	P	G	T	D	A	A	L	V	A
Query Conservation		.	.
Alig confidence		.	.																																.	.	.	.	.	.	.	.																					.										.	.
Template Conservation																																			.	.	.	.	.	.	.	.																					.										.	.
Template Sequence		S	F	L	K	D	D	E	L	K	R	K	L	R	P	D	V	V	I	R	F	G	P	M	P	V	S	K	P	V	F	L	W	L	.	.	.	.	.	.	.	.	K	D	D	P	T	I	Q	Q	I	V	I	D	E	D	G	G	W	R	D	P	.	T	Q	A	S	A	H	M	I	H	.	.	C	N	A	S	V	F	A
Template Known Secondary structure				T	T	S										S						S	S			S									.	.	.	.	.	.	.	.				T	T	S							T	T						T	.	T	S			S					.	.	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.																					.										.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	W	V	L	I	N	E	N	L	V	D	Q	P	F	L	D	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	M	A	G	L	T	A	A	T	R	S	S	E	W	L	E	K	W
Template Known Secondary structure							T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions