Job Description P76399 Confidence 99.34% Date Thu Jan 5 12:22:40 GMT 2012 Rank 9 Aligned Residues 84 % Identity 12% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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Show / Hide Conservation and Alignment quality

		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		P	A	V	R	V	G	L	N	P	Q	A	L	F	N	Q	G	V	S	L	D	D	V	R	T	A	V	S	N	A	N	V	R	K	P	Q	G	A	L	E	D	G	T	H	R	W	Q	I	Q	T	.	.	.	N	D	E	L	K	T	A	A	E	Y	Q	P	L	I	I	H	Y	N	N	G	G	A	V	R	L	G	D	V
Query Conservation																																																			.	.	.
Alig confidence																																																			.	.	.
Template Conservation
Template Sequence		P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	V	P	F	S	A	F
Template Known Secondary structure																	T															T										T	T											G	G	G	S	S	S	G	G	G	G	T	T						T	T	S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	T	D	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	S	R	W	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions