Job Description P76399 Confidence 100.00% Date Thu Jan 5 12:22:40 GMT 2012 Rank 1 Aligned Residues 991 % Identity 21% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	A	L	F	I	Y	R	P	V	A	T	I	L	L	S	V	A	I	T	L	C	G	I	L	G	F	R	M	L	P	V	A	P	L	P	Q	V	D	F	P	V	I	I	V	S	A	S	L	P	G	A	S	P	E	T	M	A	S	S	V	A	T	P	L	E	R	S	L	G	R	I	A	G	V	S	E	M	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	R	R	S	V	A	N	R	F	L	V	L	M	G	A	L	F	L	S	I	W	G	T	W	T	I	I	N	T	P	V	D	A	L	P	D	L	S	D	V	Q	V	I	I	K	T	S	Y	P	G	Q	A	P	Q	I	V	E	N	Q	V	T	Y	P	L	T	T	T	M	L	S	V	P	G	A	K	T	V	R	G
Template Known Secondary structure									T																						S				S	S															S	S										T							T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	S	L	G	S	T	R	I	I	L	Q	F	D	F	D	R	D	I	N	G	A	A	R	D	V	Q	A	A	I	N	A	A	Q	S	L	L	P	S	G	M	P	S	R	P	T	Y	R	K	A	N	P	S	D	A	P	I	M	I	L	T	L	T	S	D	T	Y	S	Q	G	E	L	Y	D	F	A	S	T	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	Q	F	G	D	S	Y	V	Y	V	I	F	E	D	G	T	D	P	Y	W	A	R	S	R	V	L	E	Y	L	N	Q	V	Q	G	K	L	P	A	G	V	S	A	E	L	G	P	D	A	T	G	V	G	W	I	Y	E	Y	A	L	V	D	R	S	G	K	H	D	L	A	D	L	R	S	L	Q	D	W	F	L
Template Known Secondary structure					S	S										S	S			T	T															T	T	S		S	S								S			G	G	G										T	T	S		S												T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	I	S	Q	I	D	G	V	G	D	V	D	V	G	G	S	S	L	P	A	V	R	V	G	L	N	P	Q	A	L	F	N	Q	G	V	S	L	D	D	V	R	T	A	V	S	N	A	N	V	R	K	P	Q	G	A	L	E	D	G	T	H	R	W	Q	I	Q	T	N	D	E	L	K	T	A	A	E	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	E	L	K	T	I	P	D	V	A	E	V	A	S	V	G	G	V	V	K	E	Y	Q	V	V	I	D	P	Q	R	L	A	Q	Y	G	I	S	L	A	E	V	K	S	A	L	D	A	S	N	Q	E	A	G	G	S	S	I	E	L	A	E	A	E	Y	M	V	R	A	S	G	Y	L	Q	T	L	D	D	F	N
Template Known Secondary structure						T	T	S	T	T									S																	T	T												T	S	S											T	T													S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		243	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure									.																																					.
Query SS confidence									.																																					.
Query Sequence		P	L	I	I	H	Y	N	.	N	G	G	A	V	R	L	G	D	V	A	T	V	T	D	S	V	Q	D	V	R	N	A	G	M	T	N	A	K	P	A	I	L	L	M	I	.	R	K	L	P	E	A	N	I	I	Q	T	V	D	S	I	R	A	K	L	P	E	L	Q	E	T	I	P	A	A	I	D	L	Q	I	A
Query Conservation									.																																					.
Alig confidence									.																																					.
Template Conservation
Template Sequence		H	I	V	L	K	A	S	E	N	G	V	P	V	Y	L	R	D	V	A	K	V	Q	I	G	P	E	M	R	R	G	I	A	E	L	N	G	E	G	E	V	A	G	G	V	V	I	L	R	S	G	K	N	A	R	E	V	I	A	A	V	K	D	K	L	E	T	L	K	S	S	L	P	E	G	V	E	I	V	T	T
Template Known Secondary structure		T							T	T	S					G	G	G	T											S						T	T	T												T	T	S																	G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	R	S	P	T	I	R	A	S	L	E	E	V	E	Q	T	L	I	I	S	V	A	L	V	I	L	V	V	F	L	F	L	R	S	G	R	A	T	I	I	P	A	V	S	V	P	V	S	L	I	G	T	F	A	A	M	Y	L	C	G	F	S	L	N	N	L	S	L	M	A	L	T	I	A	T	G	F	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	R	S	Q	L	I	D	R	A	I	D	N	L	S	G	K	L	L	E	E	F	I	V	V	A	V	V	C	A	L	F	L	W	H	V	R	S	A	L	V	A	I	I	S	L	P	L	G	L	C	I	A	F	I	V	M	H	F	Q	G	L	N	A	N	I	M	S	L	G	G	I	A	I	A	V	G	A	M	V
Template Known Secondary structure				T																																									T																	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.												.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	A	I	V	V	L	E	N	I	A	R	H	L	E	A	.	.	.	.	.	.	.	.	.	.	.	G	M	K	P	L	Q	A	A	L	Q	G	T	R	E	V	G	F	T	V	L	S	M	S	L	S	L	V	A	V	F	L	P	L	L	L	M	G	G	L	P	G	R	L	L	R	E	F	A	V	T	L	S	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	I	V	M	I	E	N	A	H	K	R	L	E	E	W	Q	H	Q	H	P	D	A	T	L	D	N	K	T	R	W	Q	V	I	T	D	A	S	V	E	V	G	P	A	L	F	I	S	L	L	I	I	T	L	S	F	I	P	I	F	T	L	E	G	Q	E	G	R	L	F	G	P	L	A	F	T	K	T	Y
Template Known Secondary structure																						S		S	S																		S																G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	I	S	L	L	V	S	L	T	L	T	P	M	M	C	G	W	M	L	K	A	S	K	P	R	E	Q	K	R	L	R	G	F	G	R	M	L	V	A	L	Q	Q	G	Y	G	K	S	L	K	W	V	L	N	H	T	R	L	V	G	V	V	L	L	G	T	I	A	L	N	I	W	L	Y	I	S	I	P	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	A	G	A	A	L	L	A	I	V	V	I	P	I	L	M	G	Y	W	P	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	L	I	R	V	Y	H	P	L	L	L	K	V	L	H	W	P	K	T	T	L	L	V	A	A	L	S	V	L	T	V	L	W	P	L	N	K	V	G	G
Template Known Secondary structure													T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															T	T					T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.																	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600								.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.																						.
Query SS confidence																																																					.	.	.	.	.	.	.																						.
Query Sequence		T	F	F	P	E	Q	D	T	G	V	L	M	G	G	I	Q	A	D	Q	S	I	S	F	Q	A	M	R	G	K	L	Q	D	F	M	K	I	I	R	D	D	P	A	V	D	N	V	T	G	F	T	G	.	.	.	.	.	.	.	G	S	R	V	N	S	G	M	M	F	I	T	L	K	P	R	D	E	R	S	E	.
Query Conservation																																																					.	.	.	.	.	.	.																						.
Alig confidence																																																					.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	F	L	P	Q	I	N	E	G	D	L	L	Y	M	P	S	T	L	P	G	I	S	A	A	E	A	A	S	M	L	Q	K	T	D	K	L	I	M	S	V	P	E	V	A	R	V	F	G	K	T	G	K	A	E	T	A	T	D	S	A	P	L	E	M	V	E	T	T	I	Q	L	K	P	Q	E	Q	W	R	P	G
Template Known Secondary structure			S	S						S										S																			T	T	S	T	T												S	S	T	T					T	T											G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
			622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.		.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																							.
Query SS confidence		.																							.
Query Sequence		.	T	A	Q	Q	I	I	D	R	L	R	V	K	L	A	K	E	P	G	A	N	L	F	.	L	M	A	V	Q	D	I	R	V	G	G	R	Q	S	N	A	S	Y	Q	Y	T	L	L	S	D	D	L	A	A	L	R	E	W	E	P	K	I	R	K	K	L	A	T	L	P	E	L	A	D	V	N	S	D	Q	Q	D
Query Conservation		.																							.
Alig confidence		.																							.
Template Conservation
Template Sequence		M	T	M	D	K	I	I	E	E	L	D	N	T	V	R	L	P	G	L	A	N	L	W	V	P	P	I	R	N	R	I	D	M	L	S	T	G	I	K	S	P	I	G	I	K	V	S	G	T	V	L	A	D	I	D	A	M	A	E	Q	I	E	E	V	A	R	T	V	P	G	V	A	S	A	L	A	E	R	L	E
Template Known Secondary structure																		T	T																T	T	T	S		S	S	S								S	S	T	T														T	T	S	S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	E	M	N	L	V	Y	D	R	D	T	M	A	R	L	G	I	D	V	Q	A	A	N	S	L	L	N	N	A	F	G	Q	R	Q	I	S	T	I	Y	Q	P	M	N	Q	Y	K	V	V	M	E	V	D	P	R	Y	T	Q	D	I	S	A	L	E	K	M	F	V	I	N	N	E	G	K	A	I	P	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	R	Y	I	N	V	E	I	N	R	E	K	A	A	R	Y	G	M	T	V	A	D	V	Q	L	F	V	T	S	A	V	G	G	A	M	V	G	E	T	V	E	G	I	A	R	Y	P	I	N	L	R	Y	P	Q	S	W	R	D	S	P	Q	A	L	R	Q	L	P	I	L	T	P	M	K	Q	Q	I	T	L	A
Template Known Secondary structure		B																T	T												T	T	T	T										T	T											G	G	G	G	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	A	K	W	Q	P	A	N	A	P	L	S	V	N	H	Q	G	L	S	A	A	S	T	I	S	F	N	L	P	T	G	K	S	L	S	D	A	S	A	A	I	D	R	A	M	T	Q	L	G	V	P	S	T	V	R	G	S	F	A	G	T	A	Q	V	F	Q	E	T	M	N	S	Q	V	I	L	I	I	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	D	I	K	V	S	T	G	P	S	M	L	K	T	E	N	A	R	P	T	S	W	I	Y	I	D	A	R	D	R	D	M	V	S	V	V	H	D	L	Q	K	A	I	A	E	K	V	Q	L	K	P	G	T	S	V	A	F	S	G	Q	F	E	L	L	E	R	A	N	H	K	L	K	L	M	V	P	M	T
Template Known Secondary structure													S						T	T											S	S	S																					T	T																					T
Template Predicted Secondary structure
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.
		860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		I	A	T	V	Y	I	V	L	G	I	L	Y	E	S	Y	V	H	P	L	T	I	L	S	T	L	P	S	A	G	V	G	A	L	L	A	L	E	L	F	N	A	P	F	S	L	I	A	L	I	G	I	M	L	L	I	G	I	V	K	K	N	A	I	M	M	V	D	F	A	L	E	A	Q	R	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	I	I	F	V	L	L	Y	L	A	F	R	R	V	G	E	A	L	L	I	I	S	S	V	P	F	A	L	V	G	G	I	W	L	L	W	W	M	G	F	H	L	S	V	A	T	G	T	G	F	I	A	L	A	G	V	A	A	E	F	G	V	V	M	L	M	Y	L	R	H	A	I	E	A	V	P	S	L	N
Template Known Secondary structure														S										T	T															T	T					T	T																														S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.
						934	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	G	N	L	T	P	Q	E	A	I	F	Q	A	C	L	L	R	F	R	P	I	M	M	T	T	L	A	A	L	F	G	A	L	P	L	V	L	S	G	G	D	G	S	E	L	R	Q	P	L	G	I	T	I	V	G	G	L	V	M	S	Q	L	L	T	L	Y	T	T	P	V	V	Y	L	F	F	D
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		N	P	Q	T	F	S	E	Q	K	L	D	E	A	L	Y	H	G	A	V	L	R	V	R	P	K	A	M	T	V	A	V	I	I	A	G	L	L	P	I	L	W	G	T	G	A	G	S	E	V	M	S	R	I	A	A	P	M	I	G	G	M	I	T	A	P	L	L	S	L	F	I	I	P	A	A	Y	K	L	M	W
Template Known Secondary structure			S	S	S	S		S	T	T	T							T	T	T	T	T														T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.