 |
Job Description | P76399 | Confidence | 19.20% | Date | Thu Jan 5 12:22:40 GMT 2012 |
Rank | 67 | Aligned Residues | 77 |
% Identity | 6% | Template | c3c6fD_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: D: PDB Molecule:yetf protein; |
PDBTitle: crystal structure of protein bsu07140 from bacillus subtilis
|
Resolution | 2.50 Å |
|
 |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | N | P | Q | A | L | F | N | Q | G | V | S | L | D | D | V | R | T | A | V | S | N | A | N | V | R | K | P | Q | G | A | L | E | D | G | T | H | R | W | Q | I | Q | T | N | D | E | L | K | T | A | A | E | Y | Q | P | L | I | I | H | Y | N | N | G | G | A | V | R | L | G | D | V | A | T | V | T | D | S | V | Q |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   | . | . | . | . | . |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|
| . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |   |
|
| . |   |
|   |   |   |   |   |
Template Sequence |   |
E | L | Q | Y | K | V | M | K | K | N | K | I | D | I | N | Q | L | Q | S | M | L | R | Q | A | G | S | F | S | . |
. |
. |
. |
. |
I | Q | E | V | E | Y | A | I | M | E | T | N | G | M | V | S | . |
. |
. |
. |
. |
. |
. |
. |
V | L | P | K | S | D | F | D | K | P | T | N | K | D | M | . |
Q | I | P | S | K | S | V |
Template Known Secondary structure |   |
 |  |
|  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | . | . | . | . | . | G | G | G |  |  |  |  |  |  |
| T | T | S |
|  |  | . | . | . | . | . | . | . | . |  |  |  |
| G | G | G | S |
|
|
| T | T | T | T | . | T |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
| . |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . | . | . |
  |
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | R | N | A | G | M | T | N | A | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|
|   |
Template Sequence |   |
S | L | P | I | T | L | I | I | D | G | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|