Job Description P76399 Confidence 12.96% Date Thu Jan 5 12:22:40 GMT 2012 Rank 80 Aligned Residues 56 % Identity 18% Template c3aqoD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: structure and function of a membrane component secdf that enhances2 protein export Resolution 2.60 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		M	I	L	T	L	T	S	D	T	Y	S	Q	G	E	L	Y	D	F	A	S	T	Q	L	A	P	T	I	S	Q	I	D	G	V	G	D	V	D	V	G	G	S	S	L	P	A	V	R	V	G	L	.	.	.	.	.	.	N	P	Q	A	L	F	N	Q
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																						.										.																				.	.	.	.	.	.
Template Conservation																						.										.
Template Sequence		I	V	L	E	A	D	V	E	N	P	T	L	D	D	L	E	K	A	R	T	.	V	L	E	N	R	I	N	A	L	.	G	V	A	E	P	L	I	Q	I	Q	G	Q	K	R	I	V	V	E	L	P	G	L	S	Q	A	D	Q	D	R	A	L	K	L
Template Known Secondary structure								S	S	S												.									T	.	T		S	S							T	T	T
Template Predicted Secondary structure																						.										.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions