 |
Job Description | P76399 | Confidence | 45.01% | Date | Thu Jan 5 12:22:40 GMT 2012 |
Rank | 44 | Aligned Residues | 65 |
% Identity | 11% | Template | c2yy3B_ |
PDB info |
PDB header:translation | Chain: B: PDB Molecule:elongation factor 1-beta; |
PDBTitle: crystal structure of translation elongation factor ef-1 beta from2 pyrococcus horikoshii
|
Resolution | 2.50 Å |
|
 |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | Q | A | A | I | N | A | A | Q | S | L | L | P | S | G | M | P | S | R | P | T | . |
Y | R | K | A | N | P | S | D | A | P | I | M | I | L | T | L | T | S | D | T | Y | S | Q | G | E | L | Y | D | F | A | S | T | Q | L | A | P | T | I | S | Q | I | D | G | V | G | D | V | D | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
| . | . | . | . | . | . |
|
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|
|
|   |
|
|
|
|
Template Sequence |   |
N | L | D | E | L | E | E | K | L | K | K | V | I | P | E | K | Y | G | L | A | K | V | E | R | E | P | I | A | F | G | L | V | A | L | K | F | Y | V | L | G | R | D | E | . |
. |
. |
. |
. |
. |
E | G | Y | S | F | D | E | V | A | E | K | F | E | E | V | E | N | V | E | S | A | E | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T |
| S |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
| S | S | . | . | . | . | . | . | T | T |
|
|  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|